Gene Arth_3716 details

Gene Information

• Locus tag: Arth_3716
• ID: 4443717
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Arthrobacter sp. FB24
• Kingdom: Bacteria
• Replicon accession: NC_008541
• Strand: +
• Start bp: 4181744
• End bp: 4183633
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639691540
• Product: choline/carnitine/betaine transporter
• Protein accession: YP_833191
• Protein GI: 116672258
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1292] Choline-glycine betaine transporter
• TIGRFAM ID: [TIGR00842] choline/carnitine/betaine transport

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.903721
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCACCC CCCCCGTTGA GCTGGAGGAG CCCAAGCTCG TTCCTGCGTC CGAGAACTCT 
CCTTCCTCCC ACGATTCACA CGATGCCGAG GACACCGAAC AGATCATGCA GGAACTCCGC 
CAGACCAAAG CCGAGCAGGC TGTGGCAGAG CGGCGGAACC GCAAACTCAC CCTCGACAAG 
GCCACCTTCG GCATCACCGG GGTTCTGGCC CTGGCCTTCG TGGCGTGGGG CTTCCTGGGC 
CGGGACAGCC TGGCCGCCAC GTCAACAGCC GCCCTCGACT GGGTAATGGA GTACACCGGC 
TGGCTCTTTA TGGTCCTGGC CTCGCTGTTC GTTGTTTTTG TGCTCTGGCT GGCCCTGGGC 
AAGTGGGGCA ACATTCCCCT CGGCAAGGAC GGCGAGAAGC CCGAGTTCCG GACCGTGTCA 
TGGATTGCCA TGATGTTTGC GGCCGGCATG GGCATCGGCC TGATGTTCTA CGGTGTGGCC 
GAGCCGCTGT ACCACTACAT CTCCCCTCCG CCGGGAACGG TGGACGGACG CACGCCGGCA 
GCCATCCAGA CGGCCATGGC AACCTCCATC TTCCACTGGA CCCTGCACCC CTGGGCGATG 
TACGCCGTCG TCGGCATTGC CATGGCCTAC GGCACCTACC GCCTGGGCCG CCGCCAGCTG 
ATCTCGGCAG CGTTCACGTC GCTGTTCGGC ATCAGGACGG TGGAAGGGCC GGTGGGCAAG 
TTCATCAACA TCCTGGCGAT CTTCGCCACG CTCTTCGGCA CGGCCGCTTC CCTGGGCCTC 
GGCGCCCTCC AGATCGGCAG CGGCCTGACG TCGAACGGCT GGATCGGGGA AGTGGGAACA 
CCCATCCTGG TGGCCATCGT TGCCGTCCTG ACAGCCTGCT TCGTGGCCTC GGCGGTGTCC 
GGCATCAGCC GCGGCATCCA GTGGCTGTCC AACATCAACA TGGTCCTGGC CGTGATCCTG 
GCGCTCATCG TTTTCCTCGC CGGGCCCACA CTGTTTATCC TCAACCTCAT TCCCGCAGCA 
GTCGGTGACT ACGCCAGGGA CCTGGCCGAG ATGTCCTCCC GCACCGAAGC CGTGGGCGAC 
GAGGCGCTCC GGACCTGGAT GTCCGGCTGG ACCATCTTCT ACTGGGCCTG GTGGGTATCG 
TGGACGCCGT TTGTGGGCAT GTTCATCGCC CGCATCAGCC GCGGCCGCAC CATCCGCCAG 
TTCGTCACCG GCGTCCTGCT GGTCCCCAGC ATCGTCAGCG TCATCTGGTT CGGTATCTTC 
GGCGGCACTG CGTTCCACGT CCAGGAGGAA GCGGACAAGG CGGGTACCCC CGGACTGGTG 
TCCATGGCCA GCGGGTCACC GTCCATCGAC TTCGACGGCG CCCTGTTCGA CCTCGTCCGG 
AACATGTCCA TGCCTGCCTG GCTCACCGCA GCAGTGGTGG TTCTCGCCAT GGTCCTGGTG 
GCCATCTTCT TCATCACCGG AGCCGATTCC GCATCGATCA TCATGGCATC CCTGAGCTCC 
AACGGGTCCT CCGACCCGAA GCGCGGCCTG GTCATCTTCT GGGGCCTGCT CACCGGCGCA 
GTAGCCGCCG TCATGATGCT GGCCGGCGGC GATGAACCCT CGGAGGCGCT CTCCGGCCTG 
CAGCGGATCA CCATCGTGGC GGCCCTGCCG TTTGTGCTGG TCATGCTGCT GCTGTGCTTC 
GCCCTGGTCA AGGACCTGCG CCGGGATCCG CTGTCCCTCC GGCGCCGACT GGCGGACTCG 
GTAGTGGAGC GCGCCATTCG CAGCGGCGTG GACCAACACG GCGGCGTCCA GTTCGATCTC 
GTTACCAAAC ATCAATGTGA TCAGCGCTGT CCGGACGACG GCCGCTGCGC GGCTTCCCCC 
GCTGACACCC AAGCCCCCGC AAAGAATTAG 

 

Protein sequence

MPTPPVELEE PKLVPASENS PSSHDSHDAE DTEQIMQELR QTKAEQAVAE RRNRKLTLDK 
ATFGITGVLA LAFVAWGFLG RDSLAATSTA ALDWVMEYTG WLFMVLASLF VVFVLWLALG 
KWGNIPLGKD GEKPEFRTVS WIAMMFAAGM GIGLMFYGVA EPLYHYISPP PGTVDGRTPA 
AIQTAMATSI FHWTLHPWAM YAVVGIAMAY GTYRLGRRQL ISAAFTSLFG IRTVEGPVGK 
FINILAIFAT LFGTAASLGL GALQIGSGLT SNGWIGEVGT PILVAIVAVL TACFVASAVS 
GISRGIQWLS NINMVLAVIL ALIVFLAGPT LFILNLIPAA VGDYARDLAE MSSRTEAVGD 
EALRTWMSGW TIFYWAWWVS WTPFVGMFIA RISRGRTIRQ FVTGVLLVPS IVSVIWFGIF 
GGTAFHVQEE ADKAGTPGLV SMASGSPSID FDGALFDLVR NMSMPAWLTA AVVVLAMVLV 
AIFFITGADS ASIIMASLSS NGSSDPKRGL VIFWGLLTGA VAAVMMLAGG DEPSEALSGL 
QRITIVAALP FVLVMLLLCF ALVKDLRRDP LSLRRRLADS VVERAIRSGV DQHGGVQFDL 
VTKHQCDQRC PDDGRCAASP ADTQAPAKN