Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Arth_2767 |
Symbol | hemC |
ID | 4444566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Arthrobacter sp. FB24 |
Kingdom | Bacteria |
Replicon accession | NC_008541 |
Strand | - |
Start bp | 3118965 |
End bp | 3119963 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639690589 |
Product | porphobilinogen deaminase |
Protein accession | YP_832246 |
Protein GI | 116671313 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00352178 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGGTCC GCATCGGGAC GCGTGCCAGC AAGCTGGCGT TGACCCAGAC CCAGCAAACA GCCGACCAGC TCGCCGCCAT TGGCGGGTTC CCCGTGGAAC TGGTGCACAT CAGGACGGAC GGGGACGTCC TGACCGGTTC GCTCTCGCAG ATGGGCGGCA CGGGAGTTTT TGTGGCGGCC TTGCGGGAGG CGCTCCTGCG GGACGACTGC GACGTTGCCG TGCACTCGCT CAAGGACCTG CCCACCGGAG CCGCGCCCGG GCTGAACCTC GCCGCGACGC CGAAGCGCGT CGACGTCCGT GACGTGCTCT GCGCGCGCGA CGGTTTCAAG CTGGCCGACC TCCCGCAGGG CGCCCGGGTG GGAACCGGTT CCCCGCGCCG AGCGGCGCAG CTCCGCGCGG CCCGTCCCGA CCTTGACGTC GTGGACATCC GTGGCAACGT GGACACCCGC CTGGGTCGTG TTCCCGGCCT GCCGGGCAAC ACCACGGATG CCGTGGTGTT GGGCAAATCC TGCGACCTCG ACGCCGTCGT GTTGGCCGCC GCCGGCCTCG AGCGCATCGG CCGGCTGGAC ACCGTTAGCG AATATCTCGA AACAGATGTC ATGCTTCCGG CCGCCGGCCA GGGGTCGCTT GCCATCGAGT GCCGCACTGC GGACGCTCCG CGAAGAACGG GATCCACCGA AGGGTCCCAG GGGCCGCTGG CCCAGGCGCT GGCAGCCCTG GACGACACGG ACACCAGGCT CGCGGTTACG GCCGAACGGG CGCTCCTGGC CCGTCTGGAG GCAGGGTGCG CAGCCCCGGT GGGTGCCTAC GCCTTCCGCA AGGGAAGCAT GCTCTACCTG GAGGCCGCCG TCTGCGCTGT CGACGGGTCA GCCACCGTCC GCGACAAGCG GGCGACGGAC GGGCTCACCG AGGTCGGCGC TACGCTTCTT GGCATCGAAC TGGCTGAGGC GCTGCTGGCA GCCGGTGCAG CCGACATCGC GGACCTTGCC GCTTCCTGA
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Protein sequence | MTVRIGTRAS KLALTQTQQT ADQLAAIGGF PVELVHIRTD GDVLTGSLSQ MGGTGVFVAA LREALLRDDC DVAVHSLKDL PTGAAPGLNL AATPKRVDVR DVLCARDGFK LADLPQGARV GTGSPRRAAQ LRAARPDLDV VDIRGNVDTR LGRVPGLPGN TTDAVVLGKS CDLDAVVLAA AGLERIGRLD TVSEYLETDV MLPAAGQGSL AIECRTADAP RRTGSTEGSQ GPLAQALAAL DDTDTRLAVT AERALLARLE AGCAAPVGAY AFRKGSMLYL EAAVCAVDGS ATVRDKRATD GLTEVGATLL GIELAEALLA AGAADIADLA AS
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