Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Arth_1129 |
Symbol | sdhA |
ID | 4446362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Arthrobacter sp. FB24 |
Kingdom | Bacteria |
Replicon accession | NC_008541 |
Strand | - |
Start bp | 1224777 |
End bp | 1226576 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639688935 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_830623 |
Protein GI | 116669690 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGGTCC ATAAGTACGA CGTCGTCATC GTCGGTGCCG GTGGCGCTGG CATGCGCGCC GCGATCGAAT CCGGTCAGCG CGCGCGCACA GCAGTACTGA CCAAGCTCTA CCCCACCCGC TCGCACACCG GTGCGGCGCA GGGTGGCATG TGTGCGGCAC TGGCCAATGT CGAGGAAGAC AACTGGGAGT GGCACACGTT CGACACCATT AAGGGCGGCG ACTACCTGGT GGACCAGGAC GCGGCCGAGG TCATGGCGAA AGAAGCCATC GACGCCGTGC TGGACCTGGA AAAAATGGGC CTGCCGTTCA ACCGCACGCC GGAAGGACGG ATTGACCAGC GCCGCTTCGG CGGCCACACC CGTGACCACG GCAAAGCCCC TGTCCGCCGG GCCTGCTACG CGGCTGACCG CACGGGCCAC ATGATCCTGC AGACGCTGTA CCAAAACTGT GTCAAGCACA ACGTTGAGTT CTACAACGAG TACTACGTCC TGGACCTCCT GACGGTTGAG GAAGACGCAG TCCGCGAAGA CGGCACGCCG TACAAGCAGA AGCGTGTTGC CGGCGTCGTG TCCTACGACC TCGCTTCCGG CGAACTGCAC GTGTTCCAGG CCAAGTCGGT GGTGTTCGCC TCCGGCGGCG CCGGCAAGGT CTTCAAGACC ACGTCCAACG CCCACACCCT GACCGGCGAC GGCATGGGCA TTGCGTTCCG CCGCGGCATT CCCCTGGAGG ACATGGAGTT CTTCCAATTC CACCCGACCG GCCTTGCCGG CCTGGGCATC CTGCTGTCGG AAGCCGCGCG TGGCGAAGGC GCCATCCTGC GCAACTCCGA GGGTGAACGC TTCATGGAGC GCTACGCCCC CACCATCAAG GACCTTGCAC CGCGTGACAT CGTGGCCCGC TCCATGGCGA ACGAAGTCCG CGAAGGCCGC GGCTGTGGAC CGAACAAGGA CTACGTGCTC CTTGACCTGA CCCACCTCGA GCCCGCGCAC ATCGACGCCA AGCTGCCGGA CATCACCGAG TTTGCGCGCA CGTACCTCGG TGTTGAGCCC TACACGGAGC CGGTTCCGGT GTTCCCGACG GCGCACTACG CCATGGGCGG CATCCCGACC AACATCACCA CCGAAGTCCT GCAGGATAAC GACACCGTGG TGCCGGGTCT CTACGCGGCC GGCGAAGTGG CCTGTGTTTC GGTTCACGGC TCCAACCGCC TGGGCACCAA CTCGCTGCTG GACATCAACG TGTTCGGCAA GCGCGCCGGC ATCGCCGCCG CGGAGTACGC CAAGACGGCT GACTTCGTGG ACCTCCCGGC CGACCCGGAG GCGTACACCA TCGAACTGCT GGACATCGCC CGCAACGGCA CCGGCGACGA GAAGGTGGCC GTGATCCGCA AGGAACTCCA GGACACCATG GACGCCAACA TGCAGGTGTT CCGCACGGCT GACACGCTGA ACCAGGTCCT CAGGGACATC GAGTCCTTCG AAGAGCGGTA CAAGCGCATC AGCGTCCAGG ACAAGGGCAA GCGCTTCAAC CTTGACCTGC TGGAGGCCGT TGAACTCGGC TTCCTGCTGG AACTGGCCAA GGTCATGACG GTGGCAGCCC TGCACCGGGA GGAGTCCCGC GGCGGACACT TCCGCGAGGA CTTCCCGGAA CGTGACGACG AAAAATTCAT GAAGCACTCC ATGGCGTACA AGGACGACCA CGCCCCGGCT GACGGCTCTG CGGAAGCAAT TGCCGGCATC CGCCTGGCCA CCAAACCGGT TGTCTTTACC CGCTACGAGC CGATGGTGAG GAAGTACTAA
|
Protein sequence | MQVHKYDVVI VGAGGAGMRA AIESGQRART AVLTKLYPTR SHTGAAQGGM CAALANVEED NWEWHTFDTI KGGDYLVDQD AAEVMAKEAI DAVLDLEKMG LPFNRTPEGR IDQRRFGGHT RDHGKAPVRR ACYAADRTGH MILQTLYQNC VKHNVEFYNE YYVLDLLTVE EDAVREDGTP YKQKRVAGVV SYDLASGELH VFQAKSVVFA SGGAGKVFKT TSNAHTLTGD GMGIAFRRGI PLEDMEFFQF HPTGLAGLGI LLSEAARGEG AILRNSEGER FMERYAPTIK DLAPRDIVAR SMANEVREGR GCGPNKDYVL LDLTHLEPAH IDAKLPDITE FARTYLGVEP YTEPVPVFPT AHYAMGGIPT NITTEVLQDN DTVVPGLYAA GEVACVSVHG SNRLGTNSLL DINVFGKRAG IAAAEYAKTA DFVDLPADPE AYTIELLDIA RNGTGDEKVA VIRKELQDTM DANMQVFRTA DTLNQVLRDI ESFEERYKRI SVQDKGKRFN LDLLEAVELG FLLELAKVMT VAALHREESR GGHFREDFPE RDDEKFMKHS MAYKDDHAPA DGSAEAIAGI RLATKPVVFT RYEPMVRKY
|
| |