| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1705 |
|---|
| Symbol | |
|---|
| ID | 8398517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 1853925 |
|---|
| End bp | 1854671 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644996068 |
|---|
| Product | 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase |
|---|
| Protein accession | YP_003153446 |
|---|
| Protein GI | 257067190 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1691] NCAIR mutase (PurE)-related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.238092 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATA AAGAATTTTT AGAAAATATT AAAAACGGCA AGATGACAAT TGATGAGGGC
TTAGCCTATC TAAAGGACTT TAATTTTAAA GATATAGATA TAGCAAAGCT CGATTTTCAA
AGAAAAAACA GGAGGGGCTT TCCTGAGACA ATCTTCTGCC AGGGCAAGGA GGACTTTGCT
TTGGTGGAAA TCTTTAAGGC CTTTGCCGAA AGAAACGACT CAGTAATAGG CACTAGGGCG
ACCAAGGACC AATACGAGCT TGTAAAAAGG GAAATTCCTC AAGCAAAATA CGACCCTACA
GGAAGGATTA TCTCCCTAGA ATATGAAAGT CTCCCTCAAA TAGGAAATAT CGCAATTTGT
ACAGGCGGAA CTGCAGATCT TTTCGTAGCA GAAGAGGCCG CCCTTACGGC AGAGTTTTTT
GGATCTAAGG TAAGTCGCTT CTACGATGTT GGAGTATCTG GTCTTCACAG GATGTTAAAT
AAAATCGACG AAATTAAAAA AGCTAATGTG ATAATTGCGA TAGCAGGAAT GGAAGGGGCC
CTTGCCACTG TTCTTGCAGG CCTTGTGGAT AAGCCAATTA TAGCAGTGCC AACTTCTGTG
GGCTATGGGG CAAGCTTTAA TGGTATATCT GCCCTCCTTA CCATGCTTTC GACCTGTGCC
GAAGGAATTT CTGTAGTAAA TATAGACAAT GGCTACGGAG CAGCCTATGC TGCTTGCCAA
ATAAATAAAC TAATAGAGGA GAAATAA
|
|---|
| Protein sequence | MNDKEFLENI KNGKMTIDEG LAYLKDFNFK DIDIAKLDFQ RKNRRGFPET IFCQGKEDFA
LVEIFKAFAE RNDSVIGTRA TKDQYELVKR EIPQAKYDPT GRIISLEYES LPQIGNIAIC
TGGTADLFVA EEAALTAEFF GSKVSRFYDV GVSGLHRMLN KIDEIKKANV IIAIAGMEGA
LATVLAGLVD KPIIAVPTSV GYGASFNGIS ALLTMLSTCA EGISVVNIDN GYGAAYAACQ
INKLIEEK
|
|---|
| |