Gene Apre_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1702 
Symbol 
ID8398514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1851319 
End bp1852302 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content39% 
IMG OID644996065 
Productsignal peptide peptidase SppA, 36K type 
Protein accessionYP_003153443 
Protein GI257067187 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000021867 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA ACGCAAAAAA ATGGATAGCC TTGGCTATAA CCGCCCTAGT CTTAGTGGTT 
TCGGTATTTG CTAAGGATAA GGACAAGGAA GTAGAGCAAA ATATAAGAGA TAAGTATATG
AAAAACTTCT CGGACTTTTC TAGTTATACG GAAGAAGTAA TCCAAGGAAC AAACCCTAAG
GAAAAAATCA AGGTCGTAGA TGTCGATGGA GTAATCTCAT CCAATGATGC CAATGACTTC
GTAGTAGAAG AGCTTAAAAA CGCCAAGGAA GATCCACTAG TTAAGGGAGT TATCCTAAAT
GTAAATTCCC CAGGTGGATC AGTCTATGCC TCCGAGAGAA TCGCAAATCA AATAAAGGCC
CTAAAAGAAG CAGAAAAACC AGTATATACT GTAATGGGTG AGATGGCAGC AAGCGGAGGC
TATTATATAT CAGCCCTAAC TGATAGGATC TACGCATCAA ATGAGACCTG GACAGGATCG
ATCGGAGTAA TCATCCAATC CTACTCCCTC CAAGGACTTT TTGAAAAGTA TGGAATTAAA
GAGCAAAATA TAACAACAGG TAAGATGAAA GATGCCGGAA GCCAAGGAAG AGATATGAGC
AAGGAAGAAA AAGAATACTT CCAAGGACTT GTAGACTCAG CCTTTGATAG ATTTGTAAAA
ATTGTAGCAG AAGGTCGTGG TCTTTCTGAA AGAGAAGTTA GGAAGCTCGC TGATGGAAGG
GTCTACGATG GTAGCCAAGC CCTAGCAAAT GGACTAGTTG ATAAAATAGG AGATCTCGAT
TCTGCTATAG GAGATATGGC AAGTGAAAAT AACTTAGAAG ATCCGATGGT AATAAGAAAT
GAAAATATTA TGGGATCTTT CTCATCAATA TTTTCAAAAG TCACAGACCT TAAGAAAAGC
GAATCCGACC TTGCAATACT TGATAAATTA ATGAAAAACG GAGGCCCAAG GCCAATGTAT
TTGTATGGTG ATTACAATGA CTGA
 
Protein sequence
MKNNAKKWIA LAITALVLVV SVFAKDKDKE VEQNIRDKYM KNFSDFSSYT EEVIQGTNPK 
EKIKVVDVDG VISSNDANDF VVEELKNAKE DPLVKGVILN VNSPGGSVYA SERIANQIKA
LKEAEKPVYT VMGEMAASGG YYISALTDRI YASNETWTGS IGVIIQSYSL QGLFEKYGIK
EQNITTGKMK DAGSQGRDMS KEEKEYFQGL VDSAFDRFVK IVAEGRGLSE REVRKLADGR
VYDGSQALAN GLVDKIGDLD SAIGDMASEN NLEDPMVIRN ENIMGSFSSI FSKVTDLKKS
ESDLAILDKL MKNGGPRPMY LYGDYND