Gene Apre_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1701 
Symbol 
ID8398513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1850850 
End bp1851338 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content36% 
IMG OID644996064 
ProductRDD domain containing protein 
Protein accessionYP_003153442 
Protein GI257067186 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000482282 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGATTA CAATGACTGA AGTTAAAATT CCTTTTAGAG AGAAAGACTA CCGCTTTGCC 
TATGCGGGAT TTTTCCTAAG ACTTGTAGCC TTTCTTATAG ATATGCTAGT TGTAGGAGGA 
ATATTTACAA TTCTAAAAGT ATTCTTGCCC TTAGATATGG ATGCAAGCAT CTTGAGTTTT 
AGCCTCGGTG AAGTCCTTAG GACAGGACTT ACTTTAGCCT ACTTTACTCT GATGACACTT 
TTCACAAGGG GAAGGACCCT AGGCAAGATG ATCTTAGGTC TTAGGGTGGT ATCCCTAACA 
AGTGATAAGC TAAGTTTCTC TCAAATAATA CTTAGAGAAA TTTGCGGGAG ATTTGTCCTA 
AATAAATTTA AAATTCTTTA CCTAATAGTT GGTCTTAGTC CCAAAAAACA AGGACTCTTT 
GATATACTTC TCGACACTAC TGTAGTTAAG GAAGATATAT TTGACCATCT GTACGGAGAA 
AATCTATAA
 
Protein sequence
MVITMTEVKI PFREKDYRFA YAGFFLRLVA FLIDMLVVGG IFTILKVFLP LDMDASILSF 
SLGEVLRTGL TLAYFTLMTL FTRGRTLGKM ILGLRVVSLT SDKLSFSQII LREICGRFVL 
NKFKILYLIV GLSPKKQGLF DILLDTTVVK EDIFDHLYGE NL