Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1683 |
Symbol | |
ID | 8398495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1831364 |
End bp | 1832950 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644996046 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_003153424 |
Protein GI | 257067168 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00319882 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAATA AAAAATCAAA ACCGGCCCTA GTCTTTGCTA TATTGGCTAT AGGTCTCAGT ATATATATTT CAAAAACAGG AGTGGATACC TATTCTAGTA TCTGGTCCTT ATTTCCACCA GTCGTAGCTA TTTTTATAGC TCTTTTTACT AAGGAAGTTT TCTCTTCCTT ATTTTTGGGG ATAACAATAG GAGCGATCCT AGGATCTAAA GGTTCTGTTG CAAAATTCTT AGATAATATC GTAAGCGAAG GCTTTATCGA ATCGATCTCA CAGACTTCAG GAATCTATAT TTTCCTTGTA GTTTTGGGAA TAATGGTAGT TCTAATAAAC TATTCTGGAG GATCACGTGC CTTTGGTAAA TGGGCCCACT CCAAGATTAA GAACAGGAAA CAATCACAGA TTGCGACATT TTTCCTTTGC ATTATGCTTT TTATAGATGA TTACTTTAAT TGTCTAACAA GTGGGTCTGT GATGAAGCCA ATTATAGATT CTCACAAGGT ATCAAGGGCT AAGCTTGCCT ACATAATCGA TGCAACAGCA GCCCCAGTTT GTATGATAGC ACCTATATCT TCATGGGCTG CGGCAGTTTC AGGTTATGCA GAATCAGGAA CTTACTCAGG AATAGAACTT TTTGTAAAGG CAATTCCCTT TAACTTCTAT TCTCTTTTAA CCTTATTCTT TGTAGTTTGT ATAATTGCTT TTAATAATGA CTACGGTCCA ATGAAAGATT ATGAACAAAA GGCCCAAACG ACAGGGGATA TCAGTATCAG AAAGGAAGAG CTAATCGATC ATAGCAAGGT AAATAGAGAA GGGGCTGTAA TAGACTTAGT CTTTCCAATC CTAGTCCTTA TAGTATCTTG TGTACTAAGC TTAATCAATG TGGGAGGATT TTTCGATACT GCAAGTCCTT ACTATCACGA TTTTGTAAAT GCCTTTGCTA ATACTGACTC ATCTATAGCC CTTGCTATGG GTTCCATTGT GGCCTTGATC ATATCCATAA TATTTTTTGT GGTAAGGAAG GTAATATCAT TTGAAAAGTC AATGGACTCA GTATCAGAAG GATTTTCATC AATGGTATCT GCTATATTAA TCTTAACTAT GGCGACAAGC TTAAAAAATA TTTCAAACGA GCTTCTAGGA TCTACCAACT TTGTTGGAGG TCTTATGGAA AATGCAGCAA GTGGCTTAAG CTCGTTCCTT CCTGTAGTTA TATTTGTTGT TGCAATATTT TTAGCCTTCG CTACAGGAAC AAGTTGGGGG ACTTTCGGTA TACTAATACC AATAGTTGTG TCCATGTTTG ACTCTCATGA TCCTATATTT TTAATAGCTA TATCTGCAAC TCTTTCAGGA TCAGTTTGTG GAGACCACTT ATCTCCAATA TCAGATACGA CTATAATGTC ATCAACTGGA GCAGGTTGCG TTCACCTAGA CCATGTCAAA AGCCAACTGC CTTATGGTTT GACTGTAGCA GCAGTAGCAT CGATTGCCTA TATCATAGCA GGCTTTACCC ATTCTTTTGT TCTTCCTTTA GCCTTTGGGA TTATAGTTAT CCTAAGTCTT ATGTTTGTCT TAAAAAAGAG GGCTTAG
|
Protein sequence | MENKKSKPAL VFAILAIGLS IYISKTGVDT YSSIWSLFPP VVAIFIALFT KEVFSSLFLG ITIGAILGSK GSVAKFLDNI VSEGFIESIS QTSGIYIFLV VLGIMVVLIN YSGGSRAFGK WAHSKIKNRK QSQIATFFLC IMLFIDDYFN CLTSGSVMKP IIDSHKVSRA KLAYIIDATA APVCMIAPIS SWAAAVSGYA ESGTYSGIEL FVKAIPFNFY SLLTLFFVVC IIAFNNDYGP MKDYEQKAQT TGDISIRKEE LIDHSKVNRE GAVIDLVFPI LVLIVSCVLS LINVGGFFDT ASPYYHDFVN AFANTDSSIA LAMGSIVALI ISIIFFVVRK VISFEKSMDS VSEGFSSMVS AILILTMATS LKNISNELLG STNFVGGLME NAASGLSSFL PVVIFVVAIF LAFATGTSWG TFGILIPIVV SMFDSHDPIF LIAISATLSG SVCGDHLSPI SDTTIMSSTG AGCVHLDHVK SQLPYGLTVA AVASIAYIIA GFTHSFVLPL AFGIIVILSL MFVLKKRA
|
| |