| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1642 |
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| Symbol | |
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| ID | 8398454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 1784272 |
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| End bp | 1785303 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644996006 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_003153384 |
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| Protein GI | 257067128 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000192835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTGATA AAATGGATAA AATAAATTTA AAAGATAAAA AAACCCTAGA GAAATTACAA
GAGTATCTCA ACTCAGAGGA CTTGACCGAA GAGGAGATTA TCTCAATTCT TGAAGGTTTA
ACAGAAGAAG AAAAAGACGA GATAATGGAT ATTATATCAG ACGAAGTGGA TGACGATGAT
GAAGATGATG ACTTTGAAGA AAGAAAGACA AATGTGTCAA AAGCTTCCAT CATGCCTATA
AGCCGCCGTG ATATGATAGA GCTATCAGAC CTTACTAATG AACAAATAGT GGAACAATTC
CAAATAGGAA ATCAGAATGC CCTAGCAGCC CTTGTAGAAA AAAACCAAGG ACTTGTTAGA
AGTAGGGCCT CATATTTCTT TAGATCTCAC GGAAACGATC TAGACCTAGA GGACTTAGTC
CAATCAGGTA TGCTCGGTAT GATTCGTGCG GCAGAAAAGT TCGACCTATC CCTAGGCTAT
AAGTTTACAA CCTATGCCTA TAAGTGGATC GATAAGGCCA TAAGAAAGGC CATAAACAAG
GAAGGCCACA CTATAAGAAT ACCTGCCGGT AAATACCTAA AACTTAATAA GCTTAAGCAA
ATTCTTAAAG CAAATCCAGA AGCAAGCGAT GAGGAGCTTT ATAGGATTTT GGAAAAGGAG
GGAATCGATA AGAAACAAGC AGACGACCTT TTCCTAATAA ATAGAAACCA AGTAAACTCC
ACATCCCTTA ACATCAACTT GGACAGTGAG GATTCGACAG GTGATGAGCT TATGGATATG
GTAGGAGATG AGTCAACTCC AGTCGATATG CTAATACTCG AAAAAGACAT GGAAAACTTC
CTCCTTAAGG CCCTAGACCA ACTAACAGAT AGGGAAAAGC AAATCATAAT ATTTAGATAT
GGACTAGATA ACGAAAAACC TAAGACCCTT GAAGAAATAG GTAAAATCTA CGACTTATCT
AGAGAAAGAA TCAGACAAAT TGAAAATCAA GCCTTGGGCA AACTGAAAGA ATTTTCTGAA
AGAGAAGAAT AA
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| Protein sequence | MGDKMDKINL KDKKTLEKLQ EYLNSEDLTE EEIISILEGL TEEEKDEIMD IISDEVDDDD
EDDDFEERKT NVSKASIMPI SRRDMIELSD LTNEQIVEQF QIGNQNALAA LVEKNQGLVR
SRASYFFRSH GNDLDLEDLV QSGMLGMIRA AEKFDLSLGY KFTTYAYKWI DKAIRKAINK
EGHTIRIPAG KYLKLNKLKQ ILKANPEASD EELYRILEKE GIDKKQADDL FLINRNQVNS
TSLNINLDSE DSTGDELMDM VGDESTPVDM LILEKDMENF LLKALDQLTD REKQIIIFRY
GLDNEKPKTL EEIGKIYDLS RERIRQIENQ ALGKLKEFSE REE
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