Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1618 |
Symbol | |
ID | 8398430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1764321 |
End bp | 1765271 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644995982 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_003153360 |
Protein GI | 257067104 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAGA CAAGAAGACT ATTATCAGTT TTGTTGCTTG CGATTTTCAT GATTACAGGA TGTAGCATTG AAGGTCAAAA CAACAAGGAA GAAAGCAAAG AAAGTGGAGT AGAAGAGAAA GCGAGTGAGA CAAAAACTGA TGGAGATATG AAAATAGGAG TTTCCCTATC AACCCTAAAC AACCCATTTT TCGTATCAAT CAGAGAAGGA GTTGAGGAAG CCGCAGGTAA AGAGAACGTA GAGACAGTAA TTACAGATGC TCAAAACGAC TCATCTACCC AAAACAACCA AGTCGAAGAC CTCATCACTC AAGGAGTTGA CTTAATAGTT ATTAACCCAG TAGATTCAAC AGCCATAGCT ACATCAGTTG AGAAGGCAAA TGAAGCAAAC ATCCCAGTAA TCTGTGTCGA CAGAGGATCA GACCAAGGTG AACTTGTAAG CTTCATAGCA AGTAACAACG TAGAAGGTGG AAAGCTTGCT GGTGAATATA TACTAGAAAA AGTAGGAGAA AATGCCGAAG TAATCCAACT TGAAGGAATC CCAGGAGCAA GCTCTACTCG TGAAAGAGGA GAAGGATTCG AAGAAGCTAC AAATGGTAAA ATCAACCTAC TAGCTAGCCA AACAGCAAAC TTTGATAGGG CAGAAGGAAT GACAGTAATG GAAAATCTTC TCCAAGCTCA CCCAGATGTA AAGGCAGTAT TCTGCCAAAA CGATGAAATG GCACTTGGAG CAAGTGAAGC CATAAAAGCA AGCGGCAAAG ATGTAACTAT TGTAGGTTTT GATGGAAATG AGGATGCAAT CAAGGCTGTA GAAGAAGGAA ATCTATCAGC AACAGTAGCC CAAAAACCAA AAGAAATGGG TAAACTTGCA ATCGAAACAG CAATCAAATA CCTAAAAGGC GAAGAGGTAG AAGAAACAGT AGACTCACCA CTAGAATTAA TCAAGAAATA A
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Protein sequence | MQKTRRLLSV LLLAIFMITG CSIEGQNNKE ESKESGVEEK ASETKTDGDM KIGVSLSTLN NPFFVSIREG VEEAAGKENV ETVITDAQND SSTQNNQVED LITQGVDLIV INPVDSTAIA TSVEKANEAN IPVICVDRGS DQGELVSFIA SNNVEGGKLA GEYILEKVGE NAEVIQLEGI PGASSTRERG EGFEEATNGK INLLASQTAN FDRAEGMTVM ENLLQAHPDV KAVFCQNDEM ALGASEAIKA SGKDVTIVGF DGNEDAIKAV EEGNLSATVA QKPKEMGKLA IETAIKYLKG EEVEETVDSP LELIKK
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