Gene Apre_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1581 
Symbol 
ID8398393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1717319 
End bp1718455 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content40% 
IMG OID644995945 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003153323 
Protein GI257067067 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA TTCAGACAAG GGATTGGGCG GTGCTTGGGC TTGCCCTCTT CCATACGACC 
CATATTGCTA TAAATCAATT CGCCCCTAGT ATTATAGAAG AGCTTGGCCT ATCTCTTAGC
ACGACCGAAA TTATCCTAAG CCTTAATGCT ATTAGTGCGA CTATTTTCTT GCTTTTGGCA
GGAGAGATTA ATGAGAAAAT TGGTATGAGG AAGTCTACTA TCTTGGGCCT ATCTCTGGTG
GCTCTCAGTG GGATAATTCC TCTTGTTTTT AGAAATAAGC TTGCTATTAT TCTAAATAGG
TTGATTCTTG GATGTGGTGT TGGTATTTAT GCGACCAATG CTTCGACTTA TATAGGGATT
TTCAATAAGG GAGCAAAGAA GGCTAGGCTT ATGGGCTACA GAAACGCCTT CGAGATGATT
GGACTAATAG TATCTATCCT CCTTGCGGGA TTTATCGGCA AGGGCAATTT TTACCTAAGC
TTTGCGATTT ATGTACTTGC CCTATTTCCC TTGATATTTT TCCTAAGAAA TGTTCCTGAT
ACTCATGAAT CCAAGAAGGA AGATTCAGGG AAGTTTAGGG CCAATAGGTT CGTGATTTTC
TACATAGTCC TTTCAATGGT AGCTATAATG GCCAACAATG CCATGAATCT GAGATTTCCT
ACAGTCCTTG CGTCCAATGG AGTCTTGGGA GAGGCTATAA GCCTTTATAC GATTTTCATA
ATGCTTGTGG GTATGGTTGG AGGATTTGCC TTTGGGAACT TTTATAATAT TTTCGAAAAG
AAGTCCCTAA GCTTTGCGAC CTCGATGATG ATTTTAGGAA GTCTTATCAT TGCCATTACT
GATAAGTCTA TCTTTCTTTT AGTCCTAGGC CTTGCCCTTG CGACATTTGC CCAAGCGATT
TGCATATCCT ATGCAGTAGG AGATTTGGAA AATCATATGG ACAAAAGACA CATAACTAAA
GCCACAGGCA TAATGTTTGC TGGAAACAAT CTCGGAGCTA TGGCCTCTCC CTTCGCCCTA
GTTTTTTTCA AAAATTTGCT TAAGACAGAA AGTTTGACCA GGGCTTTTCT AGGCTTTACA
GTTCTTTTGG CCTTGTTTTT GATCTATGAT ATATTTTTCC TTAAGGAAGA TAGATAA
 
Protein sequence
MRKIQTRDWA VLGLALFHTT HIAINQFAPS IIEELGLSLS TTEIILSLNA ISATIFLLLA 
GEINEKIGMR KSTILGLSLV ALSGIIPLVF RNKLAIILNR LILGCGVGIY ATNASTYIGI
FNKGAKKARL MGYRNAFEMI GLIVSILLAG FIGKGNFYLS FAIYVLALFP LIFFLRNVPD
THESKKEDSG KFRANRFVIF YIVLSMVAIM ANNAMNLRFP TVLASNGVLG EAISLYTIFI
MLVGMVGGFA FGNFYNIFEK KSLSFATSMM ILGSLIIAIT DKSIFLLVLG LALATFAQAI
CISYAVGDLE NHMDKRHITK ATGIMFAGNN LGAMASPFAL VFFKNLLKTE SLTRAFLGFT
VLLALFLIYD IFFLKEDR