Gene Apre_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1578 
Symbol 
ID8398390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1700217 
End bp1701521 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content45% 
IMG OID644995942 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_003153320 
Protein GI257067064 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000332533 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA ATAATAAAAT TTCGGCCAAG GCTTTGATTC CCTTTGCTAT ATTCATCGGC 
CTTTACCTAG CCACAGGCCT TTTTCTCCAA ATCAAAGGAG TCGAGATGGC CTTTTACCAA
CTACCTGCCC CTATAGCAGT CTTTGTCGCA ATTATAGTAG CCTTTTTTAT CTTTGAAGGA
AGTATAGAAG ATAAGTTCGA TACCCTAGTT TCAGGTTGTG GGGACTCTAA TATTATAATT
ATGTGTTTGA TCTACCTACT AGCGGGAGCC TTCTCCTCCC TTGCCAAGGC CTCTGGCGGA
GTGGACTCTG TAGTTGCCCT AGGACTTGCC TTTATACCAA GTGGCTTTCT TACAGCAGGA
GTCTTTCTCA TAGCTTCCTT TATATCCATT GCTACAGGAT CATCTGTAGG CACTATCACT
GCCCTTGGCC CAATCGCAGT AGGACTTGCT AATACTAGCG GTATAAGCCT TGCCCTAATG
CTAGGAGCCT TGGTGGGAGG GGCCATGTTT GGGGACAATC TTTCCATAAT CTCCGATACA
ACCATAGCCG CAACTAGGAG TCAGGGTTGT GATATGAAGG ATAAGTTTAA GATGAATGCC
AAAATCGCCA TACCCTCCGC AATCCTAACC CTTATCCTCC TTCTAGTATT CGGAGCGCCG
AAAGTTACTA CAAGTCCGAC AGACCTTACT TACGACCTTT TATCAATTAT CCCCTATCTG
TTTGTCCTTA TAGTTGCCCT TATGGGAGTC AATGTATTTG TCGTACTTAC TGGAGCAATT
GGACTTTCCT CAGCTCTTTT GCTCCTAAGA GGATCTTCCA TTATAGATAT ATCCCAAATT
ATCTGGGAAG GCTTTACAGG AATGTTTGAG ATTTTCCTTC TTTCCATGCT TATAGGAGGC
CTGTCCAAGA TGGTTGCAGA TGAAGGAGGA ATCAATTGGA TAATATCCAA GATTAAAATC
TTCGCCACAG ACCTTAGGAC AGGAGAGCTT GGCATAGGTC TTCTCGTCTG TCTAGCGGAT
ATCTGTGTCG CTAACAACAC CGTAGCAATC ATAATCTCAG GGCCTATAGC TAAGAAGATG
TCTAGAGAAT TCGAGATTGA CCCAAGGCGT AGTGCCTCCC TCCTCGATAC CTTCTCCTGT
GTCTTCCAGG GAATCATCCC CTACTCTGCC CAGGTCCTCA TTGCAGCAGG CTTTACCGGA
GGAGCCCTCG CTCCCTTCGA GCTTATACCC TTCTTCTGGT ATCAATTTAT CCTTGGCATC
CTCGCCATAA TCTCAATCCT AGCTCCTAGA GACCATAAAG AATAA
 
Protein sequence
MKENNKISAK ALIPFAIFIG LYLATGLFLQ IKGVEMAFYQ LPAPIAVFVA IIVAFFIFEG 
SIEDKFDTLV SGCGDSNIII MCLIYLLAGA FSSLAKASGG VDSVVALGLA FIPSGFLTAG
VFLIASFISI ATGSSVGTIT ALGPIAVGLA NTSGISLALM LGALVGGAMF GDNLSIISDT
TIAATRSQGC DMKDKFKMNA KIAIPSAILT LILLLVFGAP KVTTSPTDLT YDLLSIIPYL
FVLIVALMGV NVFVVLTGAI GLSSALLLLR GSSIIDISQI IWEGFTGMFE IFLLSMLIGG
LSKMVADEGG INWIISKIKI FATDLRTGEL GIGLLVCLAD ICVANNTVAI IISGPIAKKM
SREFEIDPRR SASLLDTFSC VFQGIIPYSA QVLIAAGFTG GALAPFELIP FFWYQFILGI
LAIISILAPR DHKE