Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1547 |
Symbol | |
ID | 8398359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1682522 |
End bp | 1683478 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644995911 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_003153289 |
Protein GI | 257067033 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAAA AATTAGATAC AAATATACAG ATATTGGATA TAGACGAAGA AGAAAATTAC GGTAAATTCG CCCTATATCC ACTTGAGCGA GGATATGGTA CAACCATTGG AAACAGTATG AGAAGGGTGC TTTTATCATC CTTACCTGGT TCTAGCGTCT CAAAAATACT TATAGAAGGA GTGCTTCACG AATTCTCCAC TATAGATGGA GTAGTAGAAG ATGTTCCTGA AATAGTTCTA AACATTAAGG GTCTAGACGT TACAAAACAT GTAGATGAAG ATGTAACATT GTTTTTAGAC ATTGAAGGAC CAAAGATTGT AACAGCAAAA GATATCAAAG CAGATAGTTC CGTAGATATA GCAAATCCTG ACCACTACAT CGCAACAGTT AACGAGAAGT CAAGACTATT TATAGCGATG GATGTTACAG ATGGTAAGGG TTATAGGGTA TCTGATGATA ACAAGAAAGA AAGCGACCCA ATCGGTGCAA TCGCAATTGA TTCATCATTT ACTCCAGTTG AGAAAGTAAA CTTTACTGTA GAAAATACAA GAGTAGGCGA ATCAACCGAC TATGACAAAC TCGTTATGGA AGTTTGGACA AATGGAACTA TTACACCACA AGAAGCCCTT GCAGAAGGAT CATCAATCTT AATAGAAAAC TTCTCTTTCT TCAACGAATT GCCTAACCAA CAATTCCCAC CTGAAGTGGA AGAAGAAGAA ATAGAAGAAG TAGAAGAAGA AGATAGTCTT TCAGAAGATT TGGCAATGAC AATAGAAGAA TTAGACCTAA GTCTAAGATC ATTTAATTGT CTAAAAAGAG CAGGCTTCGA CAGAGTTGGC GATATAATCA AGGTTAGCGA ATCTGAGCTA AAAACAATCA AGAACTTCGG TAAAAAGTCA CTCACAGAAG TAATAGAAAA GCTAGACGAG TTAGGTCTAA GCTTAAAAGA TGAATAG
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Protein sequence | MIEKLDTNIQ ILDIDEEENY GKFALYPLER GYGTTIGNSM RRVLLSSLPG SSVSKILIEG VLHEFSTIDG VVEDVPEIVL NIKGLDVTKH VDEDVTLFLD IEGPKIVTAK DIKADSSVDI ANPDHYIATV NEKSRLFIAM DVTDGKGYRV SDDNKKESDP IGAIAIDSSF TPVEKVNFTV ENTRVGESTD YDKLVMEVWT NGTITPQEAL AEGSSILIEN FSFFNELPNQ QFPPEVEEEE IEEVEEEDSL SEDLAMTIEE LDLSLRSFNC LKRAGFDRVG DIIKVSESEL KTIKNFGKKS LTEVIEKLDE LGLSLKDE
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