Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1533 |
Symbol | |
ID | 8398345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 1668731 |
End bp | 1669471 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644995897 |
Product | ABC transporter related |
Protein accession | YP_003153275 |
Protein GI | 257067019 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000534266 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAGA TAATTAGAGT AAACAATTTA GAGAAAAAAT TCGGGGACAA CCTAGTCCTT AAGGATATAA ATATGGCGGT AAATGAAGGA GAAGTAGTCT CTATCATAGG ATCTTCTGGA TCTGGTAAGT CGACCCTCCT TCGCTGCCTT AACCTCTTAG AATCTCCTAC AAGTGGAAAA ATTCTCTACA GGGGCGACAA CATCCTAGAC CATAAGTTCG ACCAAAGAAA ATACAGGTCT AGGGTCGGCA TGGTATTTCA AAACTTCAAT CTCTTTGCCA ACAAGACCGT CCTTGAAAAC TGTATGCTAG GTCAAATCAA AGTCCTAGGC AGAAATCACA AGGAAGCTGA AGAAATTTCT AGAAAATACC TAGAAAGCGT TAATATGCAA AACTATGTCA ACGCCAAGCC TAGCCAAATC TCCGGTGGTC AGCAACAAAG GGTAGCCATA GCCCGTGCCC TTTGCATGAA CCCTGACCTC CTACTTTTCG ATGAGCCAAC AAGTGCCCTA GACCCAGAGA CAGTAGGCGA GGTCCTAGAT GTAATGACCA AGCTTGCAAA AAGCGGGATG ACTATGATTG TAGTAACCCA CGAGATGGAC TTTGCAAGAG ATGTATCTAG CAGGGTCTTG TTCATGAACA AGGGAATCAT CCTAGAAGAC GGCACTCCAG AAAAAATATT TACAAACCCA GACCACGATA GGACCAAGGA GTTCCTAAAG AGATTTTTGG GAGAAAATTA A
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Protein sequence | MSEIIRVNNL EKKFGDNLVL KDINMAVNEG EVVSIIGSSG SGKSTLLRCL NLLESPTSGK ILYRGDNILD HKFDQRKYRS RVGMVFQNFN LFANKTVLEN CMLGQIKVLG RNHKEAEEIS RKYLESVNMQ NYVNAKPSQI SGGQQQRVAI ARALCMNPDL LLFDEPTSAL DPETVGEVLD VMTKLAKSGM TMIVVTHEMD FARDVSSRVL FMNKGIILED GTPEKIFTNP DHDRTKEFLK RFLGEN
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