| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1513 |
|---|
| Symbol | |
|---|
| ID | 8398325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 1648076 |
|---|
| End bp | 1649455 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644995877 |
|---|
| Product | amino acid carrier protein |
|---|
| Protein accession | YP_003153255 |
|---|
| Protein GI | 257066999 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1115] Na+/alanine symporter |
|---|
| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000793212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTA TTTTACGAGC AGCTGACTTT ATGTGGGCAA ACGTTATAGG GTATGTGCTT
TTGGCAGTAG GACTCTACTA TTCTCTAAGG CTAGGCTTTC CACAATTTAG ACATGCACGC
TTAATCAAAA AAGTTATCAA GAAGAATCTT AAGGCAAGCG ACGGAGTAAG CGGATTCGCA
GCCCTTGCCA CAGCGGTAGG AGGACAGGTT GGAACAGGTT CTCTAGTAGG AGTGGCGACA
GCCATAAGTC TAGGTGGACC TGGAGCGGTA TTTTGGATGT GGATTACAGC GCTTTTGGGC
ATGGTAATCA CATTTGCAGA AACTGTCCTA GGACAAATCT ACAGGGTAAA GATCGAAGAT
GGGTCTTACA GGGGAGGACC AAGCTATTAT GTGCAATTCG GTCTTAAATC TAGGTTTATG
GGAATAGTCA CAGCTTTCTT TTACATCTTG GGAGTGGGTC TTTGTATAGC CTTTATGCAA
TCAAACTCAA TAAGCCAAGC CTTTACAGGA GTTGTTGATC TAAACCCAAT TATTCCTGGA
ATCGCCGTTA CCATAGCAGC CTTTATAATC ACAATCGGTG GAGTTAAAAG ACTTACTGAC
TTTTCGTCAA AAGTCGTTCC GGTAATGGCC CTTGCTTATA TCATAGTAGT TTTAGTAATT
ATAATTACTC ATATCAGCAA ATTCCCAGCT GTTTTAGGAA TGATTTTTAC AAGTGCCTTT
AAGCCTCAGG CAGCCCTCGG TGGAATGGTA GGACATACTG TAATGGATGC CTTTAGACAA
GGTGTTGCTA GAGGACTTTT CTCAAACGAT GCTGGAAATG GTATAGCAGG TATCATGCAT
GCAGCAGCAG ACGTAGACCA CCCAGCAGAG CAAGGATTTC TTGGAATGTT TGGTACCTTC
GTTACTACAA TCATAATTTG CTCCCTATCA GCCTTCGCCC TACTTTTAAC AGGAGTTGTG
GGAAACCCTG ATAGTGGTGT AGGAATAAAC CTCGTCCAAG ACGCCTTCCA AAGCATCTTG
GGAGTTCCTG GCAGATGGCT AGTGTTTTTC GCCATGCTAA TGTTTGGCTT TACAACACTA
ATAGCAGACC TATTCTATGG TGAGAGTAAT GTAAGGCTAA TCTTTAAGGA CAAATACAAA
ATCCCTCTTT GGATCTATAG GATTATCGCC TTCATCATGT TTTTGGTGGC AACTCAAATG
GACCTTGAGC TCGTTTGGGG CTTTATAGAT GTCTTTGTAG GAATAGTAGT CTTTATCAAC
GTTATAAGCT TATTCTTCCT ATTTAAGGAT GTAAAAGGAA TCTTAGATGA CTACCAAAAT
CAACTTAAAG AAGGAAAAGA AAATCCAGTT TGGAAAAGAG ATAAAGAATA TCATCTATAA
|
|---|
| Protein sequence | MDFILRAADF MWANVIGYVL LAVGLYYSLR LGFPQFRHAR LIKKVIKKNL KASDGVSGFA
ALATAVGGQV GTGSLVGVAT AISLGGPGAV FWMWITALLG MVITFAETVL GQIYRVKIED
GSYRGGPSYY VQFGLKSRFM GIVTAFFYIL GVGLCIAFMQ SNSISQAFTG VVDLNPIIPG
IAVTIAAFII TIGGVKRLTD FSSKVVPVMA LAYIIVVLVI IITHISKFPA VLGMIFTSAF
KPQAALGGMV GHTVMDAFRQ GVARGLFSND AGNGIAGIMH AAADVDHPAE QGFLGMFGTF
VTTIIICSLS AFALLLTGVV GNPDSGVGIN LVQDAFQSIL GVPGRWLVFF AMLMFGFTTL
IADLFYGESN VRLIFKDKYK IPLWIYRIIA FIMFLVATQM DLELVWGFID VFVGIVVFIN
VISLFFLFKD VKGILDDYQN QLKEGKENPV WKRDKEYHL
|
|---|
| |