Gene Apre_1492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1492 
Symbol 
ID8398304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1626633 
End bp1627202 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content37% 
IMG OID644995856 
Productglycerol-3-phosphate responsive antiterminator, GlpP 
Protein accessionYP_003153234 
Protein GI257066978 
COG category[K] Transcription 
COG ID[COG1954] Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACACG AAGAGATTTT CGATATAATT TATGAAAATC CAATAATCAT GGCTATCAAA 
AATAACAAAG ATTTAAGAGA CTCTTTGGAT AGTGAAAACA AAATAGTGTT CGTGCTTTTT
GGTACTGTAG AAAGCATCCC ACACATAGTC AAAAAACTTA AAAAACATGG CAAGATAGTT
ATGGTTCATG AGGATTTGAT TGAAGGATTA TCAAGCTCTC CACTGTCGTC GGCTTTCATT
AAAAATTATA CTGACGCTGA TGGAATTATT ACTACGAGGC CGCAAAATGC CGCTTACGCT
AGGCAGATTG GCTTATTTGC TATTTTAAGA TTCTTTGTCC TAGATTCTCT ATCATATGAG
AATGTGAAGG AGACTGTAAA GAAGGCAAAT TGCGACCTTA TAGAGATACT TCCGGGGATT
ATGCCAAAGA TATTGGATGA TATATCAAAA AGGACTAGGA TTCCTTTGGT AGCAGGCGGG
CTAATCAACG AGAAATCGGA TGTAATCGAG GCCCTAAATG CCAACGCTAT TGCGATATCG
TCATCTAATA CCGATGTTTG GAAAATGTAA
 
Protein sequence
MTHEEIFDII YENPIIMAIK NNKDLRDSLD SENKIVFVLF GTVESIPHIV KKLKKHGKIV 
MVHEDLIEGL SSSPLSSAFI KNYTDADGII TTRPQNAAYA RQIGLFAILR FFVLDSLSYE
NVKETVKKAN CDLIEILPGI MPKILDDISK RTRIPLVAGG LINEKSDVIE ALNANAIAIS
SSNTDVWKM