Gene Apre_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1478 
Symbol 
ID8398288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1613010 
End bp1613750 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content41% 
IMG OID644995841 
ProductSilent information regulator protein Sir2 
Protein accessionYP_003153220 
Protein GI257066964 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA TTAATAAAGT TAAAGAATTA ATCAAAGATT CCAATAATAT AGTGTTTTTT 
GGAGGAGCTG GAGTATCGAC AGCATCAGGC GTGCCTGACT TTAGATCAGC TACAGGCCTT
TACAATAGGG AAAATGACTC CAAGTATTCA CCTGAATATA TGCTAAGCCA TGAGTTTTTC
GTAGACCATC CAGATGAGTT TATGGCCTAT TGTAAGAACA ATCTCATGCT TGAAGGTATA
AAGCCAAACA AGGCCCACCT AGCTCTTGCG AAGCTTGAGA AGATGGGTAA GCTTAAGGGA
GTTATCACCC AAAATATAGA CAGCCTCCAC CAAGAAGCAG GAAGTAAAAA TGTAATCGAA
CTTCACGGCA ATCTCCGTGA TTATTATTGC ACCAAGTGCG GCAAAAGCTT CGACCTCGAT
TATGTAAAAG GCTTTGCTGA TGTGGCAACT TGTGATGCTT GCGGTGGGAT TGTTCGCCCT
GACATTGTCC TTTACGGCGA GGGGCTTGAC CAAAACAATA TTAGTTATGC AGTAAATCTT
ATAGCTAATG CCGATATCCT AATAGTGGGA GGGACTTCTC TAGTAGTTTA TCCTGCGGCA
GGACTATTGG ATTTCTACAA GGGTAATAAG CTTGTTTTAA TTAACAAGGA CCCAACCAGC
AGGGATGCTA GGGCAGATTA TGTGATAAAA GGAGATATAT CCAAGATTAT GGACGAGTTA
GTTGAGGGCT TAGATGAATA A
 
Protein sequence
MEEINKVKEL IKDSNNIVFF GGAGVSTASG VPDFRSATGL YNRENDSKYS PEYMLSHEFF 
VDHPDEFMAY CKNNLMLEGI KPNKAHLALA KLEKMGKLKG VITQNIDSLH QEAGSKNVIE
LHGNLRDYYC TKCGKSFDLD YVKGFADVAT CDACGGIVRP DIVLYGEGLD QNNISYAVNL
IANADILIVG GTSLVVYPAA GLLDFYKGNK LVLINKDPTS RDARADYVIK GDISKIMDEL
VEGLDE