Gene Apre_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1383 
Symbol 
ID8398193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1487311 
End bp1488333 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content39% 
IMG OID644995748 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_003153127 
Protein GI257066871 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0242124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA AATTTAAAAC TATTTTTATG GCTGTTATTT TTGCTCTTAT ATTTACTGCC 
TGTTCTAAGG CAGATAGCGA GAGTCAAAAG ACAATTATAA GAGTCGGCCA CAACCAATCC
CAAAACCACC CAACTCACTT GGGACTTCTG GCTTTTGAGG AATATGTAGA AGACAAGCTT
GGAGACAAAT ATGATATACA AGTTTATCCA TCAGAACTTT TGGGATCGCA AATCGACATG
GTTCAGCTAA CCCAAACTGG AGCGATCAAT ATCTGTGTTG CAAGTAACGC AATCCTTGAG
ACCTTCAATG ATGTTTGGGA AATCTTTAAC CTCCCATATC TTTTCGCATC AAGCGAAGCC
TACCATCATG TAATGGACGA TCCAGAAATT GTTAAGCCTA TTTTTGAATC TACAAGAGAA
GGTGGATTTG AAGGAGTAAC TTGGCTAGAT GCAGGTTCTA GGTCCTTTTA TACCAAGGAT
AAACCAGTGA ATTCTCCAGA GGACCTTAGC GGATTAAAGA TAAGAGTTCA ACAATCTCCA
ACCAATGTTA GGATGATGGA TCTATTAGGA TCTTCTGCAT CACCTATGGG CTTTGGTGAA
GTTTATACTG CTCTTCAATC AGGTATTATC GATGGAGCGG AAAATAACGA GATGAGTCTT
ACAGATAATG GCCACGGAGA AGTGTGCAAG TACTATTCTT ACGATATGCA CCAAATGGTT
CCAGATATTG TAATTGCAAA CTACAGCTGG TTAGAAGGCC TTCCAGAGGA AGATAGAAAA
GTCTTTGATG AGGGATTTAA AGTTTTAAAC GAAGTACAAA GAAAAGAATG GAAAGTAGCA
GTAGATAAGG CTAAGGAGAA AGCAAGCGAA ATGGGAGTAG AATTTATCTA TCCTGACCAA
AAGCCTTTCG TAGACGCTGT AGCACCACTT ACAAAGGAAG TTCTAGAAAG AAATGACAAG
CTAGCTCCTT TCTACGATGC TATCCAAAAA TATAACGAAG AATACCCAGC AAAGGAGGGC
TGA
 
Protein sequence
MKSKFKTIFM AVIFALIFTA CSKADSESQK TIIRVGHNQS QNHPTHLGLL AFEEYVEDKL 
GDKYDIQVYP SELLGSQIDM VQLTQTGAIN ICVASNAILE TFNDVWEIFN LPYLFASSEA
YHHVMDDPEI VKPIFESTRE GGFEGVTWLD AGSRSFYTKD KPVNSPEDLS GLKIRVQQSP
TNVRMMDLLG SSASPMGFGE VYTALQSGII DGAENNEMSL TDNGHGEVCK YYSYDMHQMV
PDIVIANYSW LEGLPEEDRK VFDEGFKVLN EVQRKEWKVA VDKAKEKASE MGVEFIYPDQ
KPFVDAVAPL TKEVLERNDK LAPFYDAIQK YNEEYPAKEG