Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1383 |
Symbol | |
ID | 8398193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1487311 |
End bp | 1488333 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644995748 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_003153127 |
Protein GI | 257066871 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0242124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAGTA AATTTAAAAC TATTTTTATG GCTGTTATTT TTGCTCTTAT ATTTACTGCC TGTTCTAAGG CAGATAGCGA GAGTCAAAAG ACAATTATAA GAGTCGGCCA CAACCAATCC CAAAACCACC CAACTCACTT GGGACTTCTG GCTTTTGAGG AATATGTAGA AGACAAGCTT GGAGACAAAT ATGATATACA AGTTTATCCA TCAGAACTTT TGGGATCGCA AATCGACATG GTTCAGCTAA CCCAAACTGG AGCGATCAAT ATCTGTGTTG CAAGTAACGC AATCCTTGAG ACCTTCAATG ATGTTTGGGA AATCTTTAAC CTCCCATATC TTTTCGCATC AAGCGAAGCC TACCATCATG TAATGGACGA TCCAGAAATT GTTAAGCCTA TTTTTGAATC TACAAGAGAA GGTGGATTTG AAGGAGTAAC TTGGCTAGAT GCAGGTTCTA GGTCCTTTTA TACCAAGGAT AAACCAGTGA ATTCTCCAGA GGACCTTAGC GGATTAAAGA TAAGAGTTCA ACAATCTCCA ACCAATGTTA GGATGATGGA TCTATTAGGA TCTTCTGCAT CACCTATGGG CTTTGGTGAA GTTTATACTG CTCTTCAATC AGGTATTATC GATGGAGCGG AAAATAACGA GATGAGTCTT ACAGATAATG GCCACGGAGA AGTGTGCAAG TACTATTCTT ACGATATGCA CCAAATGGTT CCAGATATTG TAATTGCAAA CTACAGCTGG TTAGAAGGCC TTCCAGAGGA AGATAGAAAA GTCTTTGATG AGGGATTTAA AGTTTTAAAC GAAGTACAAA GAAAAGAATG GAAAGTAGCA GTAGATAAGG CTAAGGAGAA AGCAAGCGAA ATGGGAGTAG AATTTATCTA TCCTGACCAA AAGCCTTTCG TAGACGCTGT AGCACCACTT ACAAAGGAAG TTCTAGAAAG AAATGACAAG CTAGCTCCTT TCTACGATGC TATCCAAAAA TATAACGAAG AATACCCAGC AAAGGAGGGC TGA
|
Protein sequence | MKSKFKTIFM AVIFALIFTA CSKADSESQK TIIRVGHNQS QNHPTHLGLL AFEEYVEDKL GDKYDIQVYP SELLGSQIDM VQLTQTGAIN ICVASNAILE TFNDVWEIFN LPYLFASSEA YHHVMDDPEI VKPIFESTRE GGFEGVTWLD AGSRSFYTKD KPVNSPEDLS GLKIRVQQSP TNVRMMDLLG SSASPMGFGE VYTALQSGII DGAENNEMSL TDNGHGEVCK YYSYDMHQMV PDIVIANYSW LEGLPEEDRK VFDEGFKVLN EVQRKEWKVA VDKAKEKASE MGVEFIYPDQ KPFVDAVAPL TKEVLERNDK LAPFYDAIQK YNEEYPAKEG
|
| |