Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1358 |
Symbol | |
ID | 8398165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 1460342 |
End bp | 1460689 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644995720 |
Product | LrgA family protein |
Protein accession | YP_003153102 |
Protein GI | 257066846 |
COG category | [R] General function prediction only |
COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000290916 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTATC TAAAAGAGTT TGTAATTCTT TGCGTATGTT TATTCCTAGG TGTCATCACA AGACACCTAA TCAACTTCCC TATACCTGAG GCTGTATATG GTATGATCTA CCTCTTTATA GCCCTTAACT TTAAAATATT AAAGCCTGAG GACGTACAAA AGACTTCAGA TGGTATCTTA CACAATCTAG CCTTCCTTTT CGTTCCAGTT GGCGTTGGTA TAATGGCAAA TTACGATGTT ATCCAAGGTA AAATCGTAAA ATTACTAATT ATCACAGCAA TAGGAACAGC CTTGACAATG GCCATAACAG GCATCGTTGT TCAACTTCTA CAAAGGAGGA AGAAATAA
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Protein sequence | MNYLKEFVIL CVCLFLGVIT RHLINFPIPE AVYGMIYLFI ALNFKILKPE DVQKTSDGIL HNLAFLFVPV GVGIMANYDV IQGKIVKLLI ITAIGTALTM AITGIVVQLL QRRKK
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