Gene Apre_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1358 
Symbol 
ID8398165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1460342 
End bp1460689 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content36% 
IMG OID644995720 
ProductLrgA family protein 
Protein accessionYP_003153102 
Protein GI257066846 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000290916 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATC TAAAAGAGTT TGTAATTCTT TGCGTATGTT TATTCCTAGG TGTCATCACA 
AGACACCTAA TCAACTTCCC TATACCTGAG GCTGTATATG GTATGATCTA CCTCTTTATA
GCCCTTAACT TTAAAATATT AAAGCCTGAG GACGTACAAA AGACTTCAGA TGGTATCTTA
CACAATCTAG CCTTCCTTTT CGTTCCAGTT GGCGTTGGTA TAATGGCAAA TTACGATGTT
ATCCAAGGTA AAATCGTAAA ATTACTAATT ATCACAGCAA TAGGAACAGC CTTGACAATG
GCCATAACAG GCATCGTTGT TCAACTTCTA CAAAGGAGGA AGAAATAA
 
Protein sequence
MNYLKEFVIL CVCLFLGVIT RHLINFPIPE AVYGMIYLFI ALNFKILKPE DVQKTSDGIL 
HNLAFLFVPV GVGIMANYDV IQGKIVKLLI ITAIGTALTM AITGIVVQLL QRRKK