Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1309 |
Symbol | |
ID | 8398099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1402468 |
End bp | 1403409 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644995654 |
Product | ABC transporter related |
Protein accession | YP_003153053 |
Protein GI | 257066797 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000289319 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGAA AGGTTATTGA AGTCGAGGGT TTGGTCAAAA GTTACAAGGA CTTTATTGCA GTTGACAATT TGGATTTCGA TTTGTATAAG GGTGAGATTT TGGGACTTTT AGGTCCTAAT GGTTCTGGTA AGTCTACTAC TATTTCTTGT ATCCTATCTC TTTTGAGTAA AGATAGTGGC TCTATTAAGA TTTTTGGTGA GGAGATGAGG CCTGATTCTT ACGATATCAA AAGAAGGATA GGTGTTGTCT TTCAAGACGT AGGCGTCTAT GAGGAATTAA GTGTATATGA AAATATTGAT TATTTTTGTG GACTTTACAT AAGAGATAAG AAAAAAAGGA AAAAATATAT TGAAGAAACT GTAGATCTTG TTGGTTTGGT TGATTTTCTT AAATTTAGGC CAAAAAAGCT TTCTGGAGGT CTTTTGAGGA GACTTAATAT AGCTTGTGGC ATAGCTCACA AGCCAGAATT AATTATTTTT GATGAGCCGA CTGTTGCGGT TGATCCTCAA TCGAGAAATA ATATTTTGGA TGGAATTAGA AAGTTAAATA AAGACGGAGC AAGCATAATC TATACCTCTC ACTATATGGA TGAGGTAGAA AGCCTGTGTG ATTACATAGT TATCCTTGAT AAAGGTAAGG TTATAGCCAA GGGAGATAGT GATAGCCTTA AGGATATGAT TAATATTTGT GAGAAGATCT CCTTTGAGAC TGAAAATTTA CCTGATGAAG CCCTTGAAAG TATTAGGGCT ATTGATTCTT TGATTGATCT TTCGGTATTG GGAACAACTT ATAAGTTAAG TTTTTCTAAA TCCAGGGATA ACATTACAAG GCTAGTAGAA ATCCTAAGGA CATATGATAT AGACTATGAT CATCTTTCAT CTTCTAGGCC AAGCCTTAAT GATGTATTCT TACAGCTTAC TGGTAAAGAA TTGAGGGATT AG
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Protein sequence | MAGKVIEVEG LVKSYKDFIA VDNLDFDLYK GEILGLLGPN GSGKSTTISC ILSLLSKDSG SIKIFGEEMR PDSYDIKRRI GVVFQDVGVY EELSVYENID YFCGLYIRDK KKRKKYIEET VDLVGLVDFL KFRPKKLSGG LLRRLNIACG IAHKPELIIF DEPTVAVDPQ SRNNILDGIR KLNKDGASII YTSHYMDEVE SLCDYIVILD KGKVIAKGDS DSLKDMINIC EKISFETENL PDEALESIRA IDSLIDLSVL GTTYKLSFSK SRDNITRLVE ILRTYDIDYD HLSSSRPSLN DVFLQLTGKE LRD
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