| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1215 |
|---|
| Symbol | |
|---|
| ID | 8398004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 1295798 |
|---|
| End bp | 1296511 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644995560 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003152960 |
|---|
| Protein GI | 257066704 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAA TAAATATTTT AATAGTAGAA GATGAAAAAA CTATATCTGA TATAGTTAAA
AATTATTTGA TAAAAGATGG CTACCATGTC TTTCAGGCTT TCGACGGAGT AAAGGCACTT
GAGATTTTTA ATGAGGAACA GATCGATCTT GTGATACTTG ATCTCATGCT TCCAATGCTT
TCTGGCGAAG AAGTCTTAAA AGATATAAGA AATAAATCCC AAGTTCCTGT TATAATAACT
TCTGCCAAGG TCGAGGAGTT CGATAGGATC CAAGGACTAA GGCTTGGGGC AGATGATTAT
GTAACCAAAC CTTTTTCTAA CAAGGAACTT GTAGAAAGAG TTAAGGCTGT TCTTAGAAGG
ATTGAAAAAT ACAATATCCC TAGAGCTGAT ATTATAAAAA CAAATGATGG AAGACTTCTA
ATGGATCTAA AATACAATAG ATTCCTAAAA GATGGCAGGG AGATTTCTCT CACTAAGAAC
GAATTTTCTA TTGTAAAGAC CCTATTTTCA AGTCCAAACA AGATCTTTAC AAGAGATGAG
ATAATAGAGC TTACCTTTGG CCTAGATTAT GACGCCTACG ACAGGGCAAT AGATACTCAT
ATCAAAAATA TTAGGCAAAA AATCGAGGAC AATCCCAAAA AGCCTCAATA CATCAAGACA
ATCTATGGTA TGGGTTACAA ATCCGGTGGC GTAGATGACC TCATTAAGGA ATAA
|
|---|
| Protein sequence | MNEINILIVE DEKTISDIVK NYLIKDGYHV FQAFDGVKAL EIFNEEQIDL VILDLMLPML
SGEEVLKDIR NKSQVPVIIT SAKVEEFDRI QGLRLGADDY VTKPFSNKEL VERVKAVLRR
IEKYNIPRAD IIKTNDGRLL MDLKYNRFLK DGREISLTKN EFSIVKTLFS SPNKIFTRDE
IIELTFGLDY DAYDRAIDTH IKNIRQKIED NPKKPQYIKT IYGMGYKSGG VDDLIKE
|
|---|
| |