| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1125 |
|---|
| Symbol | |
|---|
| ID | 8397912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1210698 |
|---|
| End bp | 1211498 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644995471 |
|---|
| Product | PSP1 domain protein |
|---|
| Protein accession | YP_003152872 |
|---|
| Protein GI | 257066616 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1774] Uncharacterized homolog of PSP1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000705514 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGAGTCG TAGGAATAAG ATTTAGACCA GCGGGTAAAA TATATCATTT CGATGCAAAT
GGAATTGAAT TTGAATATAA GGATAAGGTA ATAGTAGAAA CATCCAACGG AGTAGAAATG
GCAGAAGTTG CCTTAGTTGA TGTCGACGAG TCAGAAACTA AGGGCAAGCT TTCGGAAGTA
ATTAGAAAAG CTACCAATGA TGACCTCTAT TACTACGCTA AAAACGAGCA AGATGCAAAA
GAGGCAATTA ATCTCTGCCA AGAAAAGGCC AAGGCCCATG GTCTAAAGAT GAAGATAATA
GATGCAAAAT ATACCTTTGA CAGAAGCAAA ATCACCTTCT ACTTTAAGGC TGAAAATAGG
GTAGACTTTA GGTCACTAGT AAAAGACTTG GCCTCAATCT ACAGAAATAG GATTGAGCTT
AGACAAATAG GAGTAAGAGA TCATGCCAAG ATGATTGAGC ACCTAGGCCC ATGCGGTCAA
AAATGCTGTT GCGGGAGATT TCTTAATGAC TTCAAGCCCC TATCCATAAA GATGGCCAAG
GACCAAGACA TCACCCTAGA TCCAGGCAAG ATTTCTGGTA TGTGTGGAAG GCTTATGTGC
TGCTTGTCAT ATGAAGAAGA ATGCTACAAG TGTAGCAAGA AAAAAATGCC TAAGGAAGGT
CAAAAGGTAA AGACAGCAGA CGGATACGGC ATGGTTCTTA ATAACGACTA CATCAGAGAA
TGTTCCAAAG TAAGGGTTAA ACTTACAGGA ACTGATGAAG AAATCGAAGA GACTTATGCA
TGTAAGGAAA TGGAATATTA A
|
|---|
| Protein sequence | MRVVGIRFRP AGKIYHFDAN GIEFEYKDKV IVETSNGVEM AEVALVDVDE SETKGKLSEV
IRKATNDDLY YYAKNEQDAK EAINLCQEKA KAHGLKMKII DAKYTFDRSK ITFYFKAENR
VDFRSLVKDL ASIYRNRIEL RQIGVRDHAK MIEHLGPCGQ KCCCGRFLND FKPLSIKMAK
DQDITLDPGK ISGMCGRLMC CLSYEEECYK CSKKKMPKEG QKVKTADGYG MVLNNDYIRE
CSKVRVKLTG TDEEIEETYA CKEMEY
|
|---|
| |