Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1006 |
Symbol | |
ID | 8397793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 1079018 |
End bp | 1080355 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 644995354 |
Product | Arginine decarboxylase |
Protein accession | YP_003152755 |
Protein GI | 257066499 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAAATG AAAAATTAGA CTTATATTTA AAAGAAGGAT ACTATCCTTT TCATATGCCA GGCTCTAAGA GAAGCAAAAT ACTAAGATCA GACCTTTCTT ATAGGAGAGA TTTAACTGAA ATCTATGGCT TCGATAATTT AAATGATCCA GAAGATATTT TTATCCAAAT GGAAGAAAGA TTAGCCCAAA TTTATAGGGT AAACAAAGCT ATAATTTCTA CAAACGGATC AACTTCTGGA ATTCTTTCAA CAATTAGGGC CTTGTGTAGG GATAATAAGA ATATATTGAT ACAAAGATCT TCCCACAAGT CAGTATACAA TGCTTGTGAA TTAAATTCAC TTAATGTTTC CTATACAAAT ATAGTAACTG ACGAGCAATT AGCTATAAAG GATATAGATT ATGAAAATCT AGAAGAGAAA TTAAAGGAGA AAAATTATCA GGCTCTAGTC CTAACTTCCC CTTCCTATGA AGGCTACCTC CTTGATCTTA AGAGAATATA CAAACTCTGC AGAGAAAATA ATACTAAGCT TATCCTTGAT ATGGCTCACG GGAGTCACCT TCCACTGACG AATCTCTATG ATAATTCTTT TGACCTTGCA ATTACATCTT TTCATAAAAA CTTATCTGCC CTAACTCCTT CTGCTGCAGT CCTAATCAAT GATATGGAGT ACTTTGATGA AATCAAAAGA AATATGGCAA TATTTCAGAC ATCTTCTCCT TCATATGTAA TTTTACAATC TATTGATGAA ATGATAGAAA AGTTTGAAAG TTTTGATGAG CTTTATAAAA AATTAGAAAA TAATTTAGAC GATTTATACA AGTTGAAATT AGATAATATA AAGCTAATAG AAGATTCAAG AAAAGATAAG ACTAAACTTC TTATATCTAC TAAGAATACA AATATAAATG GAAGTGATTT AGAAAAACTT CTTAGAGAAG ATAGAATCGA AATAGAAATG TCCTATCCAG ACTACGTTCT TTTAATTTCT ACAATATTTG ATACTGAGGA CGGATTTAAT AGAATAAAGA AATCCCTAAG AAGGATTGAT GGATTGTTAG GTGCGAAAAG AAAATCCTAT AGTTTAGAAC TACCAATCCC TCAAAAGAAA TTAGAAATAT ATGAAGCTAT AAATTGTAAG AAAAAATATG TAAAGGTAGA AAATTCTCTG GGAAAGATTG CAGGAGAATT TGTTTACGCC TATCCCCCAG GAAGTCCTAT AATAGCTCCC GGGGAAATAA TTGATGCAGA AATTCTAGCT ACTATTAACT ACATGTTAGA CGATAATATC CATTTAAACA TTAAAGGTGA ATATATTTCC GTCATAATTG ACAAATAA
|
Protein sequence | MLNEKLDLYL KEGYYPFHMP GSKRSKILRS DLSYRRDLTE IYGFDNLNDP EDIFIQMEER LAQIYRVNKA IISTNGSTSG ILSTIRALCR DNKNILIQRS SHKSVYNACE LNSLNVSYTN IVTDEQLAIK DIDYENLEEK LKEKNYQALV LTSPSYEGYL LDLKRIYKLC RENNTKLILD MAHGSHLPLT NLYDNSFDLA ITSFHKNLSA LTPSAAVLIN DMEYFDEIKR NMAIFQTSSP SYVILQSIDE MIEKFESFDE LYKKLENNLD DLYKLKLDNI KLIEDSRKDK TKLLISTKNT NINGSDLEKL LREDRIEIEM SYPDYVLLIS TIFDTEDGFN RIKKSLRRID GLLGAKRKSY SLELPIPQKK LEIYEAINCK KKYVKVENSL GKIAGEFVYA YPPGSPIIAP GEIIDAEILA TINYMLDDNI HLNIKGEYIS VIIDK
|
| |