Gene Apre_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1006 
Symbol 
ID8397793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1079018 
End bp1080355 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content30% 
IMG OID644995354 
ProductArginine decarboxylase 
Protein accessionYP_003152755 
Protein GI257066499 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAATG AAAAATTAGA CTTATATTTA AAAGAAGGAT ACTATCCTTT TCATATGCCA 
GGCTCTAAGA GAAGCAAAAT ACTAAGATCA GACCTTTCTT ATAGGAGAGA TTTAACTGAA
ATCTATGGCT TCGATAATTT AAATGATCCA GAAGATATTT TTATCCAAAT GGAAGAAAGA
TTAGCCCAAA TTTATAGGGT AAACAAAGCT ATAATTTCTA CAAACGGATC AACTTCTGGA
ATTCTTTCAA CAATTAGGGC CTTGTGTAGG GATAATAAGA ATATATTGAT ACAAAGATCT
TCCCACAAGT CAGTATACAA TGCTTGTGAA TTAAATTCAC TTAATGTTTC CTATACAAAT
ATAGTAACTG ACGAGCAATT AGCTATAAAG GATATAGATT ATGAAAATCT AGAAGAGAAA
TTAAAGGAGA AAAATTATCA GGCTCTAGTC CTAACTTCCC CTTCCTATGA AGGCTACCTC
CTTGATCTTA AGAGAATATA CAAACTCTGC AGAGAAAATA ATACTAAGCT TATCCTTGAT
ATGGCTCACG GGAGTCACCT TCCACTGACG AATCTCTATG ATAATTCTTT TGACCTTGCA
ATTACATCTT TTCATAAAAA CTTATCTGCC CTAACTCCTT CTGCTGCAGT CCTAATCAAT
GATATGGAGT ACTTTGATGA AATCAAAAGA AATATGGCAA TATTTCAGAC ATCTTCTCCT
TCATATGTAA TTTTACAATC TATTGATGAA ATGATAGAAA AGTTTGAAAG TTTTGATGAG
CTTTATAAAA AATTAGAAAA TAATTTAGAC GATTTATACA AGTTGAAATT AGATAATATA
AAGCTAATAG AAGATTCAAG AAAAGATAAG ACTAAACTTC TTATATCTAC TAAGAATACA
AATATAAATG GAAGTGATTT AGAAAAACTT CTTAGAGAAG ATAGAATCGA AATAGAAATG
TCCTATCCAG ACTACGTTCT TTTAATTTCT ACAATATTTG ATACTGAGGA CGGATTTAAT
AGAATAAAGA AATCCCTAAG AAGGATTGAT GGATTGTTAG GTGCGAAAAG AAAATCCTAT
AGTTTAGAAC TACCAATCCC TCAAAAGAAA TTAGAAATAT ATGAAGCTAT AAATTGTAAG
AAAAAATATG TAAAGGTAGA AAATTCTCTG GGAAAGATTG CAGGAGAATT TGTTTACGCC
TATCCCCCAG GAAGTCCTAT AATAGCTCCC GGGGAAATAA TTGATGCAGA AATTCTAGCT
ACTATTAACT ACATGTTAGA CGATAATATC CATTTAAACA TTAAAGGTGA ATATATTTCC
GTCATAATTG ACAAATAA
 
Protein sequence
MLNEKLDLYL KEGYYPFHMP GSKRSKILRS DLSYRRDLTE IYGFDNLNDP EDIFIQMEER 
LAQIYRVNKA IISTNGSTSG ILSTIRALCR DNKNILIQRS SHKSVYNACE LNSLNVSYTN
IVTDEQLAIK DIDYENLEEK LKEKNYQALV LTSPSYEGYL LDLKRIYKLC RENNTKLILD
MAHGSHLPLT NLYDNSFDLA ITSFHKNLSA LTPSAAVLIN DMEYFDEIKR NMAIFQTSSP
SYVILQSIDE MIEKFESFDE LYKKLENNLD DLYKLKLDNI KLIEDSRKDK TKLLISTKNT
NINGSDLEKL LREDRIEIEM SYPDYVLLIS TIFDTEDGFN RIKKSLRRID GLLGAKRKSY
SLELPIPQKK LEIYEAINCK KKYVKVENSL GKIAGEFVYA YPPGSPIIAP GEIIDAEILA
TINYMLDDNI HLNIKGEYIS VIIDK