Gene Apre_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0990 
Symbol 
ID8397776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1060478 
End bp1060966 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content31% 
IMG OID644995337 
Productprotein of unknown function DUF988 
Protein accessionYP_003152739 
Protein GI257066483 
COG category[S] Function unknown 
COG ID[COG4708] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.242201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA ATTTGGATAC TAATTTTTTA GTAAAATCCG CAATCGTTGC AGCTTTGTAT 
GCTGTGCTTA CTTTATTGTT GCCTATGGCA TCATATGGAC CAATCCAACT AAGATTTAGT 
GAAATTATGG TTCTTCTTGT ATTTTATAAC AAGAGATTCA TACCAGGTCT TGTGTTAGGA 
TGTGCTATAG CCAACTTGTT TTCACCAATG GCAGCGTTTG ATGTGGTGTT TGGAACCTTA 
TCATCATATA TTGCTTTCCG TCTTATCTTA AAGAGTAAGA CTTTATTTAA GGCATCTTTA 
TGGCCAGTAC TGATGGTGAT TGTGCCTGCT TTGGGAACAT ATTTTATTTT AGCAAATGAT 
GCTGTATTAT TTATTATGAT TCTCGAGTTT ATGGCAAGCG AATTTATTAT GGTAAGTATT 
ATAGGTGTTT TAATATTTAA AATGCTTGAA AAGAATGATG GTTTTATGAA ATATATTAGA 
GAATTTTAA
 
Protein sequence
MKNNLDTNFL VKSAIVAALY AVLTLLLPMA SYGPIQLRFS EIMVLLVFYN KRFIPGLVLG 
CAIANLFSPM AAFDVVFGTL SSYIAFRLIL KSKTLFKASL WPVLMVIVPA LGTYFILAND 
AVLFIMILEF MASEFIMVSI IGVLIFKMLE KNDGFMKYIR EF