Gene Apre_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0972 
Symbol 
ID8397758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1041020 
End bp1041469 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content37% 
IMG OID644995319 
Productsugar-phosphate isomerase, RpiB/LacA/LacB family 
Protein accessionYP_003152721 
Protein GI257066465 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATG TAATAGGAAA TGACCATGGA GGTCTTGATT TAGAAGAAGT AGTAAAGGAT 
GAATTAGAAA AGCTTGGGCA TGAGGTTTAT CATGTAGGAG CTTATGATAG TGAGTCTGTA
GATTATAGCG ATTATGCAAA AAAGGCTTGT ACCGAGGTGA TTGAAGGAAG AGCTGATTTT
GCTATCTTAA TTTGTGGTAC TGGACTTGGT ATGAGTATCT CAGCAAATAA GATTCAGGGT
ATTAGGGCAG CGTGCGTTTC TGAAGCTTAC TCAGCAAGGA TGAGTAGGGC TCATAATAAT
GCTAATACCC TATGTATGGG AGCTCGCGTC ATAGGCTCTG AAACATGTAG AATGATTGTA
GATGAATTTG TCAATACTAA ATTTGAAGGC GGAAGACATC AACGAAGAGT AGATAAAATT
ATGGATATAG AAAAATCCAA TAAAGCTTAG
 
Protein sequence
MKYVIGNDHG GLDLEEVVKD ELEKLGHEVY HVGAYDSESV DYSDYAKKAC TEVIEGRADF 
AILICGTGLG MSISANKIQG IRAACVSEAY SARMSRAHNN ANTLCMGARV IGSETCRMIV
DEFVNTKFEG GRHQRRVDKI MDIEKSNKA