| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0886 |
|---|
| Symbol | |
|---|
| ID | 8397672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 959483 |
|---|
| End bp | 960307 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 644995233 |
|---|
| Product | RNA binding S1 domain protein |
|---|
| Protein accession | YP_003152635 |
|---|
| Protein GI | 257066379 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2996] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000369657 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTATCAAAG AATTTACTAT AAAAAGATTT AGCAAAAATA AGGCATATCT TAAAACAAAA
TTAGGAGATG CTGTAATAGA TAAAAAATAT GTGAAGGACA TGAGGGTTAA TGATAAGGTA
AGCGCAGTTA TATATCACGA TAGAAATCAA GTCTTGAGGG CAGCTGTCGA TTTCCCATAT
GAAATAGGAT CTATTCACTC GCTTAAGGCT GTAGATATTG ATAAAAAAGG CGTTTATTTT
GAAATAGAAA ATAATCAAAA TATCTTCATG CCTTTTACTG AAAGAACATA CAAAATCATA
ATGGATATGA CTTATCCAGT AGCTTTCAAA GAAGACAGAA ACGCTTATGT ATACCTAACT
TCCAAGATAA GAGACTTGCT TAGAAATGAT CACTCATACG AGGAAAATGA CGAAGTAAGC
GGTAGGATTT ATTCCATAAA TAAGTCTATA GGCGCATTTA TTGCAGTTGA TAATAAATAT
GACTCCCTAC TTAGAATTGT TGAACTTAGA GGAGTTCATA TAGAAGGCGA GTTAATTGAA
GCTAGGGTTA AGGAAGTAAA AGATGATGGT AAGCTTGAGC TTTCATTGAG GCAAAGGGCT
TACTTACAGA TGGATGATGA TAGTGACAAA ATCCTTGATT ATCTTTATGA AAATGATGGA
ATTGCATATT TTTCAGACAA GTCTTCGCCT GATAATATAT ATAGGGTTTT TAATATGAGC
AAATCTGCTT TTAAACGAGC TTTAGGAAGA CTTTATAAGA ATAATGATAT AATTATATAT
AAAGACAGAA TTGAACTAAA GGAGGATAAA TATGACAGAA GATAA
|
|---|
| Protein sequence | MIKEFTIKRF SKNKAYLKTK LGDAVIDKKY VKDMRVNDKV SAVIYHDRNQ VLRAAVDFPY
EIGSIHSLKA VDIDKKGVYF EIENNQNIFM PFTERTYKII MDMTYPVAFK EDRNAYVYLT
SKIRDLLRND HSYEENDEVS GRIYSINKSI GAFIAVDNKY DSLLRIVELR GVHIEGELIE
ARVKEVKDDG KLELSLRQRA YLQMDDDSDK ILDYLYENDG IAYFSDKSSP DNIYRVFNMS
KSAFKRALGR LYKNNDIIIY KDRIELKEDK YDRR
|
|---|
| |