Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0681 |
Symbol | |
ID | 8397462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 779552 |
End bp | 781642 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 644995036 |
Product | overcoming lysogenization defect protein |
Protein accession | YP_003152441 |
Protein GI | 257066185 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTAA AAAAGATGAA AGTCAAAAAC TTTAGATTAT TAAAAAATTT TGAGTTAAAT TTTAAAGATG AATTGTCGCT AGTTATAGGT AAAAATAATT GTGGAAAAAC ATCATCTATT ATTGTTTTAG ATAAAATGCT AAATTCATCT AAATTATTTT GGGAAGATAT AAATTTAGAA TGCCAGAAAG ATCTCTATAA AAAAATAATT GGTTTTGATA TAACAAAGCT GGATGAAGTT CAATTATTAG AAACTATTAA TATGCAATTA TTCATTGAGT ATAATGATAA TGATTCATAT GAGAATATTC AAAAATTCAT GATGGACTTA AATCCAGATA ATAACATAAT AGTTTTAGAA TTTATTTCGG TAATAGCTGC AAAAAAAATC ATAGAATTAA AAAACATTAT TAGTGAAAAA AATATTGAAG ATTTTAAATC ATTTTCCAAA TTTATGAGTA AGAATTTTGC AAACTTCTTT GAAACGAAAA AATATTCAAG AGGGTTTGAT GTTGAAGCAA ACAAAACAAC GCAAGATAGA TCAGAAGAAA TTGATAATAA AGATATTCAA AAAGTCATTA AAGTGGCAGG AATAAGAGCT GATCGAGCGG TTTCTAATGA TGATCGTAAT CATGTTTTAT CAGGTTTAAC TGGTAAATAT TTCAGTTCTT ATAAAGCTGC AAAAGATGAA AGTGAATCGG TATTTACAAG ACTTGAAGAA AAATTGGAGG AAGCCGATAA AGAATTATAT AAGATTTACA ATGGAGAAAA AAGTGAAGGT GAAGAACCCA TTGATGGTAT TTTTAGTGAT GTTATAGATG TTATTAAAAC TTATGGTGGT GCAGAAAATG GAATTGATAT AGCAATAGAG TCATCTATTT CAGAGAAAAA TTTATTGTCA GATAATACAA ACTTAAGTTA TAGACAAGGG GGAGATTATT CGCTTCCAGA AACATATAAT GGATTGGGGT ATTTAAATTT AATTGGTATT TTATTTGAGA TTGAAACCAA TATACAGGAA TTGTTTGAAC AACCAGCAGA TATAAATCTC TTATATATTG AAGAACCTGA AGCACATACA CACCCTCAGT TACAGTATAT ATTTATAAGG AATATTAAAT CTCATATCAA AGCACATAGA AATAAGTTGT TGAAAGAAAA GAATAAGCAG TTGCAGATTT TAATCACTTC GCATTCATCA CATATAGTTT CTGAATGTAA CTTTGATGAC ATTATATATT TGAAGAAAAA CGGGAATACG GTCATAGCTA AGAGCTTTAA TTCTTTAAAA GAAGAGTATG GTGGAGATGA ACAGAAAGGA TTTAAGTTTG TAAAACAATA TTTGACAATG AATAGAAGTG AACTATTCTT TGCGGATAAA GCTATTTGTA TAGAAGGAGA TACCGAACGA ATTTTAATGC CAGTGATGAT GCATAAAATT GATAATAAAG AAAAGCCAAG AGCAGATATT ATACCACTAT TATCACAGAA TATTTCTATA ATAGAAGTTG GAGCGCATTC TCATATATTT ATGCCTTTAT TTTCCTTTTT AGGAACAAAA GTTTTGTTTG TTACGGATAT TGACTCTGTT AAAGCTGAAA AGAAAATAGA TAAAAATGGA AAAGAAAGAA CTGTATATAC GAGTTGTCAC CCCGATGAGG GAACACATAC AAGTAACGCA TCAATAAAAG AATTTTTTAA AGATACTGGA ATTGATACAT CGAATAATCA ATTTAAGGAA CTTGTAGGGA AAAATGCTGA GGATAAAATT AAAGATAATA TGAGAATGGC CTATCAAATA CCAGAATCTT ATGGTGAGTA TCAAGCGAGT AGTTTTGAAG ATGCATTTAT AGCACTAAAT AAAGACTTTA TATTAAAAAA CAAAGAAGGG TTTTATCAAT ATGGAGCTTT AAAAGATTTT TCGAATGATG AAATAGAAAA TGGTGATTAT TATAATTTTG CTTTGAATAA TGTGAAAAAG AAATCGGCAT TTGCATCAAG CTTATTGTAT TTTGATAATG AGAATGGCGA AGAAGATGAA AAATGGGCAG TTCCACATTA TATTGAGGAG GGCTTATTAT GGATACGCTA A
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Protein sequence | MILKKMKVKN FRLLKNFELN FKDELSLVIG KNNCGKTSSI IVLDKMLNSS KLFWEDINLE CQKDLYKKII GFDITKLDEV QLLETINMQL FIEYNDNDSY ENIQKFMMDL NPDNNIIVLE FISVIAAKKI IELKNIISEK NIEDFKSFSK FMSKNFANFF ETKKYSRGFD VEANKTTQDR SEEIDNKDIQ KVIKVAGIRA DRAVSNDDRN HVLSGLTGKY FSSYKAAKDE SESVFTRLEE KLEEADKELY KIYNGEKSEG EEPIDGIFSD VIDVIKTYGG AENGIDIAIE SSISEKNLLS DNTNLSYRQG GDYSLPETYN GLGYLNLIGI LFEIETNIQE LFEQPADINL LYIEEPEAHT HPQLQYIFIR NIKSHIKAHR NKLLKEKNKQ LQILITSHSS HIVSECNFDD IIYLKKNGNT VIAKSFNSLK EEYGGDEQKG FKFVKQYLTM NRSELFFADK AICIEGDTER ILMPVMMHKI DNKEKPRADI IPLLSQNISI IEVGAHSHIF MPLFSFLGTK VLFVTDIDSV KAEKKIDKNG KERTVYTSCH PDEGTHTSNA SIKEFFKDTG IDTSNNQFKE LVGKNAEDKI KDNMRMAYQI PESYGEYQAS SFEDAFIALN KDFILKNKEG FYQYGALKDF SNDEIENGDY YNFALNNVKK KSAFASSLLY FDNENGEEDE KWAVPHYIEE GLLWIR
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