Gene Apre_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0516 
Symbol 
ID8397293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp593465 
End bp594562 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content39% 
IMG OID644994875 
Productperiplasmic solute binding protein 
Protein accessionYP_003152284 
Protein GI257066028 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTA AAAATATAAT AGGAGTTTTA GCCTTAAGTG CAGTTCTTGC TGCTTGTGGA 
AACAATGCTT CAGAAAATGC AAAGACTGAC TCTAACGAGA CAAAAGAAGA GATGACCGTA 
AAGGAAGATA GCAAAGACCA AGCTAAGTCT AGTGAAGATA AGAAGGATTC ATCTGCTGAA 
AAAGCTAGTG AAGAAAATGT AATCTATGCT TCATTTTTCC CAATCTATAA TCTTACTAAG 
CAAATCGCAG GAGATAAGTT TGAGGTGAAA TCTTTTACAA ATCTTAAGAC AGAAAGTCAT 
GGATTTGAGC CTTCTGCAAA GGAAATTGCA GAATTATCTA CTTCAAAACT TATGTTTGTA 
AATGGTGCTG GTATGGAAGA GTGGGAAGAA GCCGTAAAAA ACACAGTAGA TATTGATATT 
GTAAATACAA GCGAGGGAAT CGATCTTATT AAGGCAAGCG AAGATGATCA CGATCATGAC 
CATGAAGACG CAGACCACGA CCATGATCAT GAAGATGCAG ACCATGATCA CGACCATGAA 
GATGGTGAGG AAGGTCATGA ACATCACCAC CACGGTGAGT TTGACCCACA CACATGGCTA 
GATCCAGCAA ATGGTAAGGC TCAAGCTAAG GTAATAGCTG ATAAGCTTTC AGAAGTAGAC 
CCTGCCAACA AGGATTACTA CATGGCAAAT TACGAAAAGA TTGCCAAAGA ACTTGATGAC 
ATAGTTACTG AATACAAGGA TAAGTTTAAA AATGTAGATA ACAAGAAGTT TATTGTTCCT 
CACCAAGCCT TTGGCTACCT TGCTCGTGAG TTTGACCTAG AGCAAATCCC ACTTAACTCT 
CTAACATCTA CTGGAGAAGC TGATGCTAAG GTCCTTAAGG AAGTATCTGA TCTTGCTAAG 
GCTGAAAAAA TTAAGACAGT CTTCTACGAA ATGGGCGGTT CTGATAAGGA AGCAAAGACC 
CTAGCAGATG AAATCGGTGC TGAGGCTAAG CCAATCAACA CACTCGAGTT TGCAACTGAC 
GAAGAGCTTT CTTCAAACAA GACCTACCAA GAAATGATCA AGGAAAACTT AGAAGCAATC 
TACGATTCTC TATCATAG
 
Protein sequence
MKVKNIIGVL ALSAVLAACG NNASENAKTD SNETKEEMTV KEDSKDQAKS SEDKKDSSAE 
KASEENVIYA SFFPIYNLTK QIAGDKFEVK SFTNLKTESH GFEPSAKEIA ELSTSKLMFV 
NGAGMEEWEE AVKNTVDIDI VNTSEGIDLI KASEDDHDHD HEDADHDHDH EDADHDHDHE 
DGEEGHEHHH HGEFDPHTWL DPANGKAQAK VIADKLSEVD PANKDYYMAN YEKIAKELDD 
IVTEYKDKFK NVDNKKFIVP HQAFGYLARE FDLEQIPLNS LTSTGEADAK VLKEVSDLAK 
AEKIKTVFYE MGGSDKEAKT LADEIGAEAK PINTLEFATD EELSSNKTYQ EMIKENLEAI 
YDSLS