Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0496 |
Symbol | |
ID | 8397272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 569025 |
End bp | 569396 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644994854 |
Product | endoribonuclease L-PSP |
Protein accession | YP_003152264 |
Protein GI | 257066008 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0676524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAA TTAACACAAA TGATGCTCCA AAAGCAGTAG GAGCTTACGT ACAAGGTATA GCTACAGATA GTTTAGTATT TACTTCAGGA CAACTTCCAC TTGATCCAAA AACAGGAGAG CTAGTTACAG AAATTAAAGC TGCAACCAAA CAAGCTCTAG AAAATGTAGA AAACATCTTA AAAGAAGCAG GATCAAGCAG GGATAAGGTT ATTAAATGTG TTGTTTACTT AAACGATATC AATAACTTCA AGGCATTTGA TGAAGTATAT GCAGAGTTTT TCAAAGATCA CAAACCAGCT AGATCAGCTT TCGAAGTAGC AAATCTTCCA AAAGACGGCC TACTAGAAAT CGAAGCTATC GCAAGCTTAT AA
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Protein sequence | MKAINTNDAP KAVGAYVQGI ATDSLVFTSG QLPLDPKTGE LVTEIKAATK QALENVENIL KEAGSSRDKV IKCVVYLNDI NNFKAFDEVY AEFFKDHKPA RSAFEVANLP KDGLLEIEAI ASL
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