Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0407 |
Symbol | |
ID | 8397181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 461230 |
End bp | 461952 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644994765 |
Product | ABC transporter related |
Protein accession | YP_003152177 |
Protein GI | 257065921 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAG TTTCGAATTT TTCAAAGATT TATTCCAACG GCAAAAAGGC CGTTGACGAT ATTTCTTTTA CTGTCAATGA TGGAGAGATA TTTGGATTCT TAGGCCCAAA TGGAGCAGGT AAGTCTACTA CTATAAAAAG CATCGTAGGA ATCAATTCAA AGACAAATGG AGAGATTAGC ATAAATGGCA AGACTCTAGA AGAAGATGCC AAGGCCTACA AGAGCGAGTT TTCCTATGTG CCTGATAATC CTGACCTTTT CGAGAACTAT TCAGGGAATG AATATATAAA CTTCGTCTCA GATATCTACG GGATAGATAG TAAGACTCGT AAGGAAAGGC TCGACTATTA TCTAGAGTTT TTTGACCTAA GAGATGCCAT GGACAATCAG ATAGCTAGCT TCTCCCACGG TATGGCTCAA AGGCTTGCCC TAATTGGAGC TTTGATTAAT GATCCTCCTG TGATTTTCCT AGATGAGCCA ATGGTAGGTC TCGATGCCAA GTCCGCCTAC AATCTCAAGA AAATCTTAAG GGAAAGGGCG GCGGCAGGAA AGATTGTCTT CTTCTCAACC CACGTTATGG AAATTGCCCA AGAGCTTTGC GATAGGATTG CCATAATTAA CAAAGGCAAG ATCATCACAG TAGGCACCTT CGATGAGATA AAACATGCCG CCAACAGAGA AGGCTCGCTT GAAGAAATAT TCTTGGAGCT TACGGATGAA TAA
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Protein sequence | MIKVSNFSKI YSNGKKAVDD ISFTVNDGEI FGFLGPNGAG KSTTIKSIVG INSKTNGEIS INGKTLEEDA KAYKSEFSYV PDNPDLFENY SGNEYINFVS DIYGIDSKTR KERLDYYLEF FDLRDAMDNQ IASFSHGMAQ RLALIGALIN DPPVIFLDEP MVGLDAKSAY NLKKILRERA AAGKIVFFST HVMEIAQELC DRIAIINKGK IITVGTFDEI KHAANREGSL EEIFLELTDE
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