Gene Apre_0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0326 
Symbol 
ID8397100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp370346 
End bp370966 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content39% 
IMG OID644994686 
Productprotein of unknown function DUF107 
Protein accessionYP_003152098 
Protein GI257065842 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1030] Membrane-bound serine protease (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0124428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTTG AACTTGTTAT TGGCTTAAGT TTTGTACTGG CTGTTGTAAG CTTGATTTCA 
GTTTTGTTTA CTGAGAAGAA GGCCTTTTTT GCTATTAGTG CTTTGGCCTT TTTGGGGGTG 
TTTTATTTTA CTAATTCTAC CCATCCAATC GCTGAAGTCT GGCCTTTGAT TTCTTTTGTG 
GCGGGGGTTA CTCTCCTTGC TCTTGAGATT TTTATTCCAA GTTTCGGCCT TATTGGAATC 
TGTGGTCTGG TCCTAGTTGG ACTATCCCTC TACAATTCCT TTATGATGGA TGGCAGAGAA 
GTGATTCTTC TTGTAGCTGC AACTCTTGCT ATCATCCTAA GTGTTACTGT TTATGTGACT 
CTTGGTTTTA GGGCCAATAT TTTCGATAAG GAAATATTAA AAAGTGTAAA TAGTAGGGAG 
AGAGGTTACA ATTCCAAAGT CGATTATTCT CATCTGCTAG CTAAGAGGGG AAGGACTAAG 
TCCATTCTAA GACCTACTGG AAGGATTGAG ATCGATGGGA AGTATTACGA TGCGACTAGC 
CAGGGAGATT TTATAAAGCC CCTAGCTAAG ATTGAAGTTG TTAGTGTAAA AGATGGCCAC 
ATTGTGGTAA AGGAGATATG A
 
Protein sequence
MMFELVIGLS FVLAVVSLIS VLFTEKKAFF AISALAFLGV FYFTNSTHPI AEVWPLISFV 
AGVTLLALEI FIPSFGLIGI CGLVLVGLSL YNSFMMDGRE VILLVAATLA IILSVTVYVT 
LGFRANIFDK EILKSVNSRE RGYNSKVDYS HLLAKRGRTK SILRPTGRIE IDGKYYDATS 
QGDFIKPLAK IEVVSVKDGH IVVKEI