Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0231 |
Symbol | |
ID | 8397005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 263445 |
End bp | 264266 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644994592 |
Product | Cof-like hydrolase |
Protein accession | YP_003152004 |
Protein GI | 257065748 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG ATATAAAATT AATTGTATTT GACATAGATG GTACTTTAGT AAATGATAAA AAAGAAATGC TTGACGAAAA CGTCACAGCT ATAAAGAAAC TTAAGGAAAA GGGAATTAAG ATAGTCCTAA ACTCCGGCAG GACCTTCAAT GGTATGTGGA GGATGCGTCA AAAGCTTGAC CTTATGGCCT ATGACGACTA TTCTATCTGC GGAACTGGAG CTTTTGTAAG GAGAAATGCC GACGGCAAGG CCCTTATCTC AAATCCCTTA GGAAAGAAAG ATTACGAAAA GATCAAGAGC TTGGTAGGAG AAGAAGACTT ACAGATTACA ATCCACACCA TGAATATCCT CTACTTAAAT GCAGAAGTCC CAAATGATGC CTTCTTGTAC GACCAATGGC AAGTTTCTAT GCCTTGGTTT AAGTTTGAAA AGTTTGAAGA TATAGAGGAC AGCATATGTA GGATTGCCCT TGCAGGAGAA AAGGACCTTC TCGATAAGTT CACTGAGGAA AATAAGAAAG AGCTTGTCAA AGACTATAAG ATTATGAGAA ATGAAAAGCG TCTTCTAGAG ATCTTAAACA AAAACTCAGG CAAGTCTGAA AGTCTAAAGA AACTAGCCCA AATGCTTGAA ATCGACAGAG AAAACATCAT GTATTTTGGT GATGGGATGA ATGATGTGAA GAGCTTGGGC TTTGCAGGAT GTGGTGTGGC CATGGCTTCC GGCATGAAAG AAGCCCAAGA TGCGGCAGAC TTTGTAATAG GATCAAACGA AGAGCCTTCC ATAGCTAAGT TTCTTAAGGA GTATTTTGAT CTAGATGTCT AG
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Protein sequence | MKKDIKLIVF DIDGTLVNDK KEMLDENVTA IKKLKEKGIK IVLNSGRTFN GMWRMRQKLD LMAYDDYSIC GTGAFVRRNA DGKALISNPL GKKDYEKIKS LVGEEDLQIT IHTMNILYLN AEVPNDAFLY DQWQVSMPWF KFEKFEDIED SICRIALAGE KDLLDKFTEE NKKELVKDYK IMRNEKRLLE ILNKNSGKSE SLKKLAQMLE IDRENIMYFG DGMNDVKSLG FAGCGVAMAS GMKEAQDAAD FVIGSNEEPS IAKFLKEYFD LDV
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