Gene Apre_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0216 
Symbol 
ID8396990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp249644 
End bp250441 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content42% 
IMG OID644994577 
ProductCof-like hydrolase 
Protein accessionYP_003151989 
Protein GI257065733 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAA TCGGAGTAGA CGTCGATGGA ACTCTCGTAA ATAGCAAGAG AGTCATCACA 
GAAAGGACAA GAGAGGCCTT GATTTCTGCC ATGAAAGCTG GTCATAAGGT CGTAATAGTT
ACAGGAAGAC CAACCGCTGG AGCTAGAAAT CTTGCAGAAG CCTTAGAATT TGATAAATAC
GGCGGTCTTA TTTCAAGCTT TAATGGAGGA GCTATCACCG ACTTTGCCAC AGGTAAGGTC
CTCGCCAACC ACGAAATGGA CCATGACATT GCAGTAGAGA TGATAAAACT TGCCAAAGAC
TTGCCCCTTG AGACCATGGT GCCTTATATG GATACAGTTT TTAGCCCAAA GATCGGCCCT
TACACAGAAG GTGAGGCAAG AACTCTCAGG ATGGAAGCTA AAGAAGTAGA AGATCTCGAC
CAAACAATCG ACTTTCCTGT AAACAAAATC CTCTTTGCAG CAGACCCTGA CCTAATAGAT
GAGCCAACTA GTAAGATTAA AGAGAGATTT GGAGACCTAA CAGAACAAGT CAAATCAGCA
AGATTCTATT ACGAGGTTAT GCCTATGGGA CTTTCTAAAG GAAATAGCCT TCTAGAAATC
GCAAAAATTT TTAACATAGA CCAAAAAGAC ATCATTGCCT TTGGTGATGA GATGAATGAC
GAAACTATGA TAGAGGCTGC TGGAGTAGGA GTCGCCATGG GTAATGCAGT AAGTAAGATA
AAAGAAATAG CAGACTACGT AACCCTCACA AATGACGAGG ACGGCATAGC CTACTATCTA
GATAAATTCA TATTATAG
 
Protein sequence
MKLIGVDVDG TLVNSKRVIT ERTREALISA MKAGHKVVIV TGRPTAGARN LAEALEFDKY 
GGLISSFNGG AITDFATGKV LANHEMDHDI AVEMIKLAKD LPLETMVPYM DTVFSPKIGP
YTEGEARTLR MEAKEVEDLD QTIDFPVNKI LFAADPDLID EPTSKIKERF GDLTEQVKSA
RFYYEVMPMG LSKGNSLLEI AKIFNIDQKD IIAFGDEMND ETMIEAAGVG VAMGNAVSKI
KEIADYVTLT NDEDGIAYYL DKFIL