Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0216 |
Symbol | |
ID | 8396990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 249644 |
End bp | 250441 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644994577 |
Product | Cof-like hydrolase |
Protein accession | YP_003151989 |
Protein GI | 257065733 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAA TCGGAGTAGA CGTCGATGGA ACTCTCGTAA ATAGCAAGAG AGTCATCACA GAAAGGACAA GAGAGGCCTT GATTTCTGCC ATGAAAGCTG GTCATAAGGT CGTAATAGTT ACAGGAAGAC CAACCGCTGG AGCTAGAAAT CTTGCAGAAG CCTTAGAATT TGATAAATAC GGCGGTCTTA TTTCAAGCTT TAATGGAGGA GCTATCACCG ACTTTGCCAC AGGTAAGGTC CTCGCCAACC ACGAAATGGA CCATGACATT GCAGTAGAGA TGATAAAACT TGCCAAAGAC TTGCCCCTTG AGACCATGGT GCCTTATATG GATACAGTTT TTAGCCCAAA GATCGGCCCT TACACAGAAG GTGAGGCAAG AACTCTCAGG ATGGAAGCTA AAGAAGTAGA AGATCTCGAC CAAACAATCG ACTTTCCTGT AAACAAAATC CTCTTTGCAG CAGACCCTGA CCTAATAGAT GAGCCAACTA GTAAGATTAA AGAGAGATTT GGAGACCTAA CAGAACAAGT CAAATCAGCA AGATTCTATT ACGAGGTTAT GCCTATGGGA CTTTCTAAAG GAAATAGCCT TCTAGAAATC GCAAAAATTT TTAACATAGA CCAAAAAGAC ATCATTGCCT TTGGTGATGA GATGAATGAC GAAACTATGA TAGAGGCTGC TGGAGTAGGA GTCGCCATGG GTAATGCAGT AAGTAAGATA AAAGAAATAG CAGACTACGT AACCCTCACA AATGACGAGG ACGGCATAGC CTACTATCTA GATAAATTCA TATTATAG
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Protein sequence | MKLIGVDVDG TLVNSKRVIT ERTREALISA MKAGHKVVIV TGRPTAGARN LAEALEFDKY GGLISSFNGG AITDFATGKV LANHEMDHDI AVEMIKLAKD LPLETMVPYM DTVFSPKIGP YTEGEARTLR MEAKEVEDLD QTIDFPVNKI LFAADPDLID EPTSKIKERF GDLTEQVKSA RFYYEVMPMG LSKGNSLLEI AKIFNIDQKD IIAFGDEMND ETMIEAAGVG VAMGNAVSKI KEIADYVTLT NDEDGIAYYL DKFIL
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