Gene Apre_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0124 
Symbol 
ID8396875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp146991 
End bp147458 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content35% 
IMG OID644994462 
Producttranscriptional repressor, CtsR 
Protein accessionYP_003151897 
Protein GI257065641 
COG category[K] Transcription 
COG ID[COG4463] Transcriptional repressor of class III stress genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.407779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGTC TTACTTCAGA AATTGAGAGA TTTCTAAAAA TGATGTTAGA AGATTCTGTT 
GACGGAATGC TTGAGATCGG CAGGAATGAC TTGGCGACAC GTTTTGATTG TGCACCTAGT
CAGATAAACT ACGTTCTTTC TACAAGATTT ACCCCATATA ATGGGTACCT TATAGAAAGC
AAGCGTGGCG GCAATGGTTT TATAAAGATT ATAAGCGTTG TGGATGAAGA TTCTTATATT
TCTTATTTGA CCAAAAATCT TAAGAAAAGT ATGAGTCAGA ATAATGCCGA AAGTCTCTTT
AAAGACTTGT TGAGGAGAGA ATACTTTACA GAAAATGAGT ATTTGATGGC AAGATACGCC
ACAAGCGATA GGGCTCTTTC AAAAATAAGT GAAGTTAAGG ATAGAAATGC CGTAAGAAGT
GATATTATTA GAAATATTCT CTTAAGTCTT ATGGCAAGGA GTAACTAA
 
Protein sequence
MAGLTSEIER FLKMMLEDSV DGMLEIGRND LATRFDCAPS QINYVLSTRF TPYNGYLIES 
KRGGNGFIKI ISVVDEDSYI SYLTKNLKKS MSQNNAESLF KDLLRREYFT ENEYLMARYA
TSDRALSKIS EVKDRNAVRS DIIRNILLSL MARSN