Gene Apre_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0122 
Symbol 
ID8396873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp145145 
End bp145798 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content38% 
IMG OID644994460 
ProductTrkA-N domain protein 
Protein accessionYP_003151895 
Protein GI257065639 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00122863 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA ATGTTATAGT TTTAGGTCTC GGAAGATTTG GTTACGCTGT AGCTACCAAG 
CTTTTCGAGA AGGGAATCTA TGTAACAGCT GTAGATTCTA ATTACAATAA GATAGAAAAA 
ATCGCAAACT CTGTCTCAAG TGCTGCCCAA GGAGATATCA CAGAAGAAGT AGCTATGAAG 
TCTTTGGGAA TAAACAACTA CGATGTGGCT ATAATTGCAA CAGGAACAGA TATTGAGGCA 
TCAATCGAAG CTACTTTGAT ATGCAAGGAT AGCGGAGTTG ATAAGGTTAT AGCCAAGGCA 
ACAAGTCAAT CACACGCGAG GATACTTAAA AAAATTGGCG CCGATCAGAT AGTATATCCT 
GAGCTTGATA CAGGAGAAAG ACTTGCAAGA TCTCTTGCAG GATCAAATCT TTTAGAGCTT 
GTTCAATTTT CAAATGATTT CTCATTGATA GAGATAAAAG CTCATGAGGA TTGGATAGGT 
AAGTCTCTTA TAGAGCTTGA CTTTAGAAAG ACTTACAAGA TGAATGTAGT CGGATTCGAA 
AGAGATGGCC AGATGCTAAT GGATATAGAT CCAAGTACCG ATATTAGAAA AGGTGATGTC 
CTAGTCCTAA TAGGAGATAA TGAAAACGCT AAAGCTCTTG AGGAAAAATC GTAA
 
Protein sequence
MEKNVIVLGL GRFGYAVATK LFEKGIYVTA VDSNYNKIEK IANSVSSAAQ GDITEEVAMK 
SLGINNYDVA IIATGTDIEA SIEATLICKD SGVDKVIAKA TSQSHARILK KIGADQIVYP 
ELDTGERLAR SLAGSNLLEL VQFSNDFSLI EIKAHEDWIG KSLIELDFRK TYKMNVVGFE 
RDGQMLMDID PSTDIRKGDV LVLIGDNENA KALEEKS