| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0101 |
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| Symbol | |
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| ID | 8396852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 123546 |
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| End bp | 124202 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644994440 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003151875 |
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| Protein GI | 257065619 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00251058 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACGGAC TAATATTTGA TATTGACGGA ACGATTCTAG ATTCCATGCA TATATGGATA
AAGCCGCTTG AGGATATCTT TAAAAAATAC GGCTATGACT TAAATAAAAT CCCAAAAGAG
AAAAAGGGTC ATATAGAGGC TCTTCCCTTC TATGATATGT GTGATTTTCT ATCGAAAAAT
ATAGCAAGGG ATATGACTAA GGATGAAGTT ATTGATTATT TTGAACAAAC TATAGAAAAT
GCCTATGCAA ATGATCTCTT GCCTAAAGAT GGAGCAGCAG ATTTTTTAAA ATACTTAAAG
AAAAAGGGCT ACACACTTTC TGTAGCATCT TCTACCGACT ACAAATATCT AGAAAAGGCC
CTAAAGAGAC TAGAAGTATT TGACCTCTTC GACTTTTTGG CAACACCAGA TACAATTGGA
TATAATAAAT CAGAAAAAGA ATTCTGGGAA TATACGATCA AAAAACACGG AAAATCCCCA
GAAGACCTAA TCCTTTTCGA CGACGCTCTA TACGCCATAA AAGCAGCAAA GAAAGAAGGA
ATCAGGACAG TCGGCATAAA GGACTTTCCT TGGAATGATA AGGAGTGGGA CTATATCAAA
AAAGAATCTG ATTCCTATGT AAATAATATT TCTGAATTTG AAATCGAAAA TTTCTAA
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| Protein sequence | MYGLIFDIDG TILDSMHIWI KPLEDIFKKY GYDLNKIPKE KKGHIEALPF YDMCDFLSKN
IARDMTKDEV IDYFEQTIEN AYANDLLPKD GAADFLKYLK KKGYTLSVAS STDYKYLEKA
LKRLEVFDLF DFLATPDTIG YNKSEKEFWE YTIKKHGKSP EDLILFDDAL YAIKAAKKEG
IRTVGIKDFP WNDKEWDYIK KESDSYVNNI SEFEIENF
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