Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0053 |
Symbol | |
ID | 8396800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 64220 |
End bp | 65149 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644994390 |
Product | ABC transporter related |
Protein accession | YP_003151829 |
Protein GI | 257065573 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.916211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCTAG AAATAAAAAA CTTAAGTAAA AAATACGGAG ATAGCTATGC TGTAAAAGAC ATTTCCTTTG GCCTAGAAGA GGGAAAATTC TTGTGCCTTT TGGGCCCTTC AGGTTCTGGC AAGTCTACTA TCCTTCATTC CATCGGAGGT TTCCTGGACC ATCAAGGACA AATCATAATC GATGGAGAGG ATATAAGTTA TGAGAGTCCT GAAGAAAGGG ATGTAGCGAC AGTCTTTCAA TCCTATGCTA TATTTCCTCA TATGAATGTC CTAGAAAATG TAATGTATGG ACTAAAATTT AAGGCTAAGG ATTTAAGCAA AAAAGAGAAG AAAGAAAGAG CCCTGGAGGT TATAGAAAAG GTCGGACTTA AGGGATTTGA GAGAAGATAT GAAAGCGAGC TATCTGGAGG GCAAAAGCAG AGAGTGGCCC TTGCCAGAAG TCTAGTTATA AAACCCAAAC TCCTACTGAT GGATGAGCCC CTGTCTGCTC TTGACTACAA TTTGAGAAAT AAAATGCAAG AAGAGATAAA AAGGATACAA AAGGACTTCA AGATAACGAC TATCTTTGTA ACCCATGACC GAAATGAAGC CTTTGCCATG GCAGATGAGA TAATTATTCT AAAGGAGGGA AGGCTTATAG AAAAAGCCAG TCCCGAGGAG ATTTATAATC ATCCCAAAGA CGACTTTACT CTAAACTTCA TGGGCAAGGC CAATATGATC GGTGGGGGTT TCGTAAGACC TGAAAAGATT AGGGAAGATG ATAAGGGAGA GGAATTTACC ATAAAGGATT TAAGATTTGA AGGAGATAGG ATAAGAATTT TTCTAAAAAG AGATAATAAA GAACTTGAGA TGATTAAATT AAATGATGGG AAAAAGTACA AGATAGGAGA GAAAATAAAA GTGACCTATA GAATCGAGGA GATAAAATGA
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Protein sequence | MYLEIKNLSK KYGDSYAVKD ISFGLEEGKF LCLLGPSGSG KSTILHSIGG FLDHQGQIII DGEDISYESP EERDVATVFQ SYAIFPHMNV LENVMYGLKF KAKDLSKKEK KERALEVIEK VGLKGFERRY ESELSGGQKQ RVALARSLVI KPKLLLMDEP LSALDYNLRN KMQEEIKRIQ KDFKITTIFV THDRNEAFAM ADEIIILKEG RLIEKASPEE IYNHPKDDFT LNFMGKANMI GGGFVRPEKI REDDKGEEFT IKDLRFEGDR IRIFLKRDNK ELEMIKLNDG KKYKIGEKIK VTYRIEEIK
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