Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0043 |
Symbol | |
ID | 8396790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 52662 |
End bp | 53531 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644994380 |
Product | inner-membrane translocator |
Protein accession | YP_003151819 |
Protein GI | 257065563 |
COG category | [R] General function prediction only |
COG ID | [COG4120] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.963469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGCT TACTATCATC ACTAGGAGCA AGTATAGAAA TAGGACTAAT ATTTGCAATC CTTGCCATGG GCTACATGCT TAGCTACAAA TTCTTAAAAT ATTATGACCT CTCGCTCGAA GGAACCTATC CTTTGGGAGC TTTTGTTGCA GCAGTTCTAA TTCAGAAGGG CCTGGGTCCT TATCTTGGAA TCTTGGGAGC TATAATATGC GGTGGAGTCG GAGGATGTCT GACCTACTTT TTCTACAAAA AGATCAAGGT AGACCCACTT CTTTCAGGAA TCCTAACCCT AACCATCCTT TATTCCATAA ACTTAAGGAT AGGAGGGGCA AGTAATATCC CTATAGCAGG AAATCCAAAT ATCTTTGGGG CCCTTCCCAA ATGGCCAATC CTACTTGTCC TAACCCTAGT AATCAAACTT GCAATCGACT ATTACCTAAG AAGCGAGACA GGCTACCTAC TTAAAATTAC AGGCAATAAT AGAAAACTTG TCAAACAATT AGGTAAAAAT CCTGATAACT TTATCATGGT GGGGCTCATC CTATCAAATG CCCTCATAGG TCTAAGTGGA GGCCTTATGG CCAACTACCA AGGCTTTGCC GATATACAGA TGGGAACAGC CATGATAGTG ACAGGTCTTG CCTCAATTAT TATAGGAGAT ACCTTGATGA AATCTAGAGA TAAGCTTAGA GATACTTCAA GGGCAATACT TGGAGCAATT GTCTATAGGA TTATATCAGG CCTTGCTATT TATCTGGGAC TAAATCCAAA CGACCTAAAG CTTGTGACCG CTCTAATTGT TATAGCCTTT ATTTCCTACA ATAATTACCT AGCCAATATA AAATACAAAA GGATGGTTAA AAATGCTTGA
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Protein sequence | MTGLLSSLGA SIEIGLIFAI LAMGYMLSYK FLKYYDLSLE GTYPLGAFVA AVLIQKGLGP YLGILGAIIC GGVGGCLTYF FYKKIKVDPL LSGILTLTIL YSINLRIGGA SNIPIAGNPN IFGALPKWPI LLVLTLVIKL AIDYYLRSET GYLLKITGNN RKLVKQLGKN PDNFIMVGLI LSNALIGLSG GLMANYQGFA DIQMGTAMIV TGLASIIIGD TLMKSRDKLR DTSRAILGAI VYRIISGLAI YLGLNPNDLK LVTALIVIAF ISYNNYLANI KYKRMVKNA
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