Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0017 |
Symbol | |
ID | 8396764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 21228 |
End bp | 23204 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644994354 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003151793 |
Protein GI | 257065537 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0118989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCGA CTTTTAAAAA ATCTGTAAAA TCATATGGAA GTTTCTTGAA AAATTTCTTC TTAAGAGCCT TCACATTCTC TAAGGGAGAA GAATTCAATG ATAGTAATTC TTCCTTTGAT AATAAATCTG ACAATAAATC GGATGATGAA TTACTCCATA GTGATAATAA AAACGTGGAC AAGGGACCTA GAAAGGAAGA CGAAAATGAT AAGCTAAAAG AAGAAGCTAT CATGTCTCCG GGCAAGGTAG CCCTTAGAAA CTACTTTAGA AATCCTTTGG GTATTATTGG ACTTGTGCTT TTTGTAGCGA TTGTCTTAGT AGTATTTGTA GGAAGTAAAG TTCTTCCCTT TAACCAATAC TACTCCCAAG GAAACTTAAC TAATGTAGGT CCTGGTGGAG CTTATATGAA CTATCCTTCT GATCTAGAAA AAGAGGGAGT TGAGAAAATT TCTATAGGTA ATACCTTCTC TGCAGGACTT AGCAAGGGGG GACATCTCTA TGTTTGGGGA TCTGACAACG AAGATAAGGT CCTAGAAATC CCAGATAAGG CCAAGGAAGC CTTAGCTAAC AAAAAAATAG TAGATATAGC AGCAGGTGAT AGACATATAA TAGCTGCTAC AGAAGATAAC GAGATATACG GCTGGGGTAA CAATGCCTTC CAACAAAACC AAATGCCACC AATGGATGAG GCTAAGGTAA AAGAAGAAGG AATAGAAAAA CTCGGCGCAG GTGTTCAATA CTCAGTAATT CTTACAAAGA AAAACAACCT AGTAGTATGG GGATCAACCC TTGCAAGTAG ACTTAACCTT CTTCCTTCTG ATATTAAGGG ACAAGTTGTA GATTTTGCAA CAAATCCAAT CAATATCCTA GCTATAATGA AGGACGGATC TGTCAGACTT TTGGGTGTAA TGGGTGCAGA AATTGACACT CAAATGCCAG AAGAGCTTAA GACAGGCAAG GTTAAGACTA AAAAGGTAGC CCTAACTTCC TCATCAGCAG CAGCCCTATC AGAAGATGGC AATCTTTATG TTTGGGGACC TACTAGAGAT AAGGTTTCAG GAGATTCGAT CCCAAAATTT GAAGCTCCTC TAGTTGATAT CAAGGCTAGT GATTCAGTGT TCACAGCCCT TGACGAAAAC GGTAAAATCT ACCAATGGGG TAAGGAAAAC TACGGAGAGC TAAAGACTCC TGAAGGAGAA TTTGATCAAA TTTATTCTTC ATATTTCAAC AACTACGCAG TAAGTAAAGA AGGCAAAATC GAAACTTGGG GTCTAAATGG CTTTAGATTT GGTTCTGACG ATCAAGGTCG TGATATTTTC ACAAGATTAA TCCATGGTGG TAAGATGACC ATGGTAATTT CCTTGATCTC TACTGTAATC CAAATAGTCC TCGGTGTACT AATCGGTATG ATTTCAGGTT TTGCTGGCGG AAAGATAGAC AATGTATTGA TGAGATTTTC TGAAATTGTG GCATCCTTCC CATTCTATCC AATGTTGATT TCCCTATCAG CCCTCCTTCC ACCAGGAGCA AGCCAAGAGC AAAGGATCAC TATGGTTATG ATTCTTCTAG GTCTACTCGG TTGGACGGGA CTTGCAAGAC TTGTTCGTGG ACAAATCCTT GCTGAAAGAG AAAGAGACTA TATAACAGCA GCGAGAGCCT TGGGAGTTAA GAATTGGTCT ATTATGATCA AGCACATCTT CCCAAATATC TTATCAATAG TAATTGTAAA TGCGACTATA GGTTATGCTG GAAACTTACT AACAGAATCT GGTCTATCCT TCCTAGGTTT TGGTGTACAA GAACCAACTC CTTCTTGGGG TAATATGCTT ACTGCAGCCC AATCATCAGA CGTACTAAAC ACTTACTGGT GGAGGTGGGT ATTCCCAGCA CTTGCAGTAT TCTTGACATC ATTTTCTGTA AACCTAATCG GTGACGCCCT AAGGGATGCC ATCGACCCAA GAGCAAATGA AAGATAG
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Protein sequence | MNATFKKSVK SYGSFLKNFF LRAFTFSKGE EFNDSNSSFD NKSDNKSDDE LLHSDNKNVD KGPRKEDEND KLKEEAIMSP GKVALRNYFR NPLGIIGLVL FVAIVLVVFV GSKVLPFNQY YSQGNLTNVG PGGAYMNYPS DLEKEGVEKI SIGNTFSAGL SKGGHLYVWG SDNEDKVLEI PDKAKEALAN KKIVDIAAGD RHIIAATEDN EIYGWGNNAF QQNQMPPMDE AKVKEEGIEK LGAGVQYSVI LTKKNNLVVW GSTLASRLNL LPSDIKGQVV DFATNPINIL AIMKDGSVRL LGVMGAEIDT QMPEELKTGK VKTKKVALTS SSAAALSEDG NLYVWGPTRD KVSGDSIPKF EAPLVDIKAS DSVFTALDEN GKIYQWGKEN YGELKTPEGE FDQIYSSYFN NYAVSKEGKI ETWGLNGFRF GSDDQGRDIF TRLIHGGKMT MVISLISTVI QIVLGVLIGM ISGFAGGKID NVLMRFSEIV ASFPFYPMLI SLSALLPPGA SQEQRITMVM ILLGLLGWTG LARLVRGQIL AERERDYITA ARALGVKNWS IMIKHIFPNI LSIVIVNATI GYAGNLLTES GLSFLGFGVQ EPTPSWGNML TAAQSSDVLN TYWWRWVFPA LAVFLTSFSV NLIGDALRDA IDPRANER
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