| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0013 |
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| Symbol | |
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| ID | 8396760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | + |
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| Start bp | 13115 |
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| End bp | 14884 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644994350 |
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| Product | peptidoglycan hydrolase |
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| Protein accession | YP_003151789 |
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| Protein GI | 257065533 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0013556 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGG TAAATAAAAC AATACTGTTA GCATCAACAT TGTTTATATC TCAGGCAATT
ATGTCAGGAA CATATTCATA TGCAGAGGAA GATTATAAAC TAGATGTTGA TGAGAGCTTA
TCAGAAGATA TTGGAGAAAA AGAAGCATCA ACTAGTGCAG AAGATAATTC AATAGCAACA
TACGATGAGG ACAACCTTGA TAGAATCCTA TCTGACTTAG AAGAGATGGG ATATGCCAAT
ACAAGCGAGA AAGAGCTTGA AGCTTCTAGC GAAGAAGATA AGGCGAAGGA GTCTGGGGAA
AAGGAACTTG CTCCTGAACA AGAAATCCCA CTCAAGGAGA TTTCTGGAGA TAAGGGACCA
GCTGATGACC AAAATGCTAA GGAAGATACT TCTAAGGATA TCATCTATTA TGATAATTCT
AGTCTTGATG ATATATATAA GGAAGTTGAG GCCCACGAAG CTAATACATC TACATCAGAC
AGGGGAAATT CTTCCGAAGG TAGATCAGCA AGTAAGTCTG ATTGGTATGA GGAAGATTCC
AAAGTATACC ACAAGGATAG CCAAGGAAAT CTAAGCAAGG GTCTTTCCGA GATAGATGGC
AAGAAATACT ACTTTGCAAA TGATGGAAGC CTTCAAACAA ACAAAAAAGT CCTTACAAAT
GACTCCTATT ACGAAGCAAG CGATAGGGGC ATCCTAAGCA CAAAAGCTAA TGCTTGGGTC
AAAGTAAATG GCAAGACATA TCGTACAGAT GAGAATGGAA AAATCTATAA GGGTCTTACT
AAAGTTGGAA ATGACTACTA TAACTTCGAT GGAAATGGAG TACTTACAAC AGACTTCAAG
GAAATAAAAG ACGGAAAGTT ATATATAAGT AATAAGGATG GCAAAATTAC AAATCCTAAG
AACTTCTGGG TTGCAATAGA TGGTAAGACC TATAGAAGTG GCGATGATGG AAAACTTGTA
AGAGGTGCTC GTAATATAGG CAAATACACC TATGTCTTCG ACAAAGATGG TGTTATGGCC
CAAAATAAGG GAATAATGTC TGCAGGTAGG TTCTACAAGA CAGACAAGAG GGGAGTTGCT
ACAAATCCAA AGAACGCTTG GTTTGACTAT AATGGCAACA AATACCACAC CAATGTCAAT
GGTTATGTCC AAGAAGGTGT TTGGGAAATA GATGGAAATT ATTATTACTT CACATCAAAT
GGCCTTCAAA AAAACACAGA GGTGACTCAA GGTGGAGTAA CCTACAAGGT TGATGGAAAT
GGTCTTGCAA AGCCAGTAGA TAACAACATC AAAGGCTCAA AGAACCTCGA TAAGGCTATG
GAGTGGATGT TTACAGCAAG AAGAGCTGGC CTAACATATG ATATGCACTG GAAAAATAGA
AACTCTGACT GGGCAGCAGA TTGCTCATCA GCAGTTTATA GGTCTCTAAT CTACGGAGGC
TTCCTAAAAC AAGGTTCAGC CGTAGGAAAT ACAGAAACCC TCTTCAAACT TGGAGCAGCA
GGCAAGGTAA TGTATGAGAT CTCTGAAAGC GAGATAAGAT ACGGAGATAT ATTCGTATCA
GGAAGACCTG GGGCAAGTGC AGGAGCTGCT GGTCACACAG GCTTTATCCT AAACAGAGCA
AATGATACAA TAATCCACAT GTCCTACGGC CAAGACGGAA TAGCTGTTAC TCCTAGAAAA
GGATACATGG GAGATTCTTC TGGTCTACCA GTAAGATACT ACAGACTTGT GGGAGCAGAT
TCAGACAGAC TATACGAAAA CAAAAAATAA
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| Protein sequence | MKKVNKTILL ASTLFISQAI MSGTYSYAEE DYKLDVDESL SEDIGEKEAS TSAEDNSIAT
YDEDNLDRIL SDLEEMGYAN TSEKELEASS EEDKAKESGE KELAPEQEIP LKEISGDKGP
ADDQNAKEDT SKDIIYYDNS SLDDIYKEVE AHEANTSTSD RGNSSEGRSA SKSDWYEEDS
KVYHKDSQGN LSKGLSEIDG KKYYFANDGS LQTNKKVLTN DSYYEASDRG ILSTKANAWV
KVNGKTYRTD ENGKIYKGLT KVGNDYYNFD GNGVLTTDFK EIKDGKLYIS NKDGKITNPK
NFWVAIDGKT YRSGDDGKLV RGARNIGKYT YVFDKDGVMA QNKGIMSAGR FYKTDKRGVA
TNPKNAWFDY NGNKYHTNVN GYVQEGVWEI DGNYYYFTSN GLQKNTEVTQ GGVTYKVDGN
GLAKPVDNNI KGSKNLDKAM EWMFTARRAG LTYDMHWKNR NSDWAADCSS AVYRSLIYGG
FLKQGSAVGN TETLFKLGAA GKVMYEISES EIRYGDIFVS GRPGASAGAA GHTGFILNRA
NDTIIHMSYG QDGIAVTPRK GYMGDSSGLP VRYYRLVGAD SDRLYENKK
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