Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0002 |
Symbol | |
ID | 8396749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 1858 |
End bp | 2970 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644994339 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_003151778 |
Protein GI | 257065522 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA AAATCAACCA GCAAGATTTA ATGAACGCTA TTACCATTGC TATGAAAGCA GTCTCAAAGA GTACCAATAT ACAGATACAT GAATTAATAT ACTTTGAGTG TTCTGCTAGC TCTCTTTCAC TAAGAGCCTT TGATGGAGAA ATATCTATAA AAACAAAAGT TGATGCCGTA GTAGATGAAG AAGGAGAAAT GGCAGTAAAG GCGAGTCTAA TCTCCAATAT AGTAAGAAAA CTTCCAAACG ACATAGTTAT AATAGAAAAC AAAAATGGCA AGATCTCTAT CAAATGTTCA TCTTCAAGCT TTAACCTCAT AGCCTTCGAC TATTATGATA AAAATGATAT TAACATTCCA GAAACTAAGC CAATAGAAAT AGCTAATGAT ATCCTCAAAA GATCCATAGG CCAGACCGAG TTTGCTACAA GTCTAGATGA GACCAAGCTT GCTCTAACAG GAATATTATT TGAACTAAAA GAAGGATACG TCAATATGGT GGCTCTCGAT GGCTACAGGG TTTCCCTAAA GAAGATAAAA CTCGATTATC CAACAGACTA TGAGGATAGT GAATATATCA TACCTAAGAG GTCCCTACTA GAATGGTCTA GGATTGTTTC AGATGATTTG ACAACTAAGC TATACAAGAA TGAAAATGAC CTAATATTTA CAAGCGGTAG CACTACCATG CAATGCAAGG TAATTGATAA AAACTTTATC GACTATAGAA ATATAATAAA TGATATTTCT GAAACTAGCG TTATTCTAGA CAAAAGAGAC TTGATCAATT CCCTAGATCG TGCCCAAGTC TTATCAGATC CAGGTAGGGC GAACCTTATT AAAATCGAGC TTTCAGATAA TGTTATGCTT ATAAAGTCAA ACTCAGAGAT AGGGGATGTC AGGGAAGCTA TAGATGTAGA GCAAAAGGGA AATGATCTGG AGATAGCTTT TAATGCTAGA TATATGCAAG AAGGGGTAAA GGCTTGTGAT TCATCAAAGA TAAAGCTAAA CTTCAAATCA TCCCTAAATC CATGCCTAAT ATATCCAGAA AACTCAAGCT ACGAAGATGA GGACTTTACC TACCTAGTTC TTCCAGTAAG ACTTGCGAAT TGA
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Protein sequence | MKFKINQQDL MNAITIAMKA VSKSTNIQIH ELIYFECSAS SLSLRAFDGE ISIKTKVDAV VDEEGEMAVK ASLISNIVRK LPNDIVIIEN KNGKISIKCS SSSFNLIAFD YYDKNDINIP ETKPIEIAND ILKRSIGQTE FATSLDETKL ALTGILFELK EGYVNMVALD GYRVSLKKIK LDYPTDYEDS EYIIPKRSLL EWSRIVSDDL TTKLYKNEND LIFTSGSTTM QCKVIDKNFI DYRNIINDIS ETSVILDKRD LINSLDRAQV LSDPGRANLI KIELSDNVML IKSNSEIGDV REAIDVEQKG NDLEIAFNAR YMQEGVKACD SSKIKLNFKS SLNPCLIYPE NSSYEDEDFT YLVLPVRLAN
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