| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1340 |
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| Symbol | |
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| ID | 8414228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1507460 |
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| End bp | 1509253 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022940 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_003180355 |
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| Protein GI | 257785138 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00115725 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGTGACT CGCGGTCACA GACCACGCAG ACCACATATA TACATGCACC TTCTGCTCAG
CAGACAACTT TTGCGGCTGA GCCGGAAGTT TTGCTGGATC GATATCGCGT TCTTGCCCGT
AGAGGTAATG GAGGCTTTGG TACTGTTTGT ACCTGCTGGG ATACTCGCTT GCAGAGGCGT
GTAGCTATCA AACGCATGCC ACTTTTAGGT GCTTCCGAAA CTCCTGGTGT GCTGGCCTCT
ACGGTTGATG AAGCGCTCGC AGAGGCGCGA ACTGCCTGCT TATTAGCACA CCCCAACATT
GTGACCGTTC ATGACTTTGA AATTGAAGGT AATTACGCCT ACCTAGTTAT GGAGTTTGTA
GACGGTCTCA ACCTATCTGA GCTCCTAGCT CGTGTTGAAG GCGGCTATCT TACCTACGCT
GAAGCTGCTC ACATGGTCTC TTCACTTGCC AAGGCGCTCC AGTACGCCCA CGATAACGGC
GTTCTTCACC TGGATATCAA GCCAACTAAC ATTATGATTG ACCGTCAAGG TACCGTAAAA
CTTGCCGATT TTGGTATGGC AACGCTTGCT TCGGCTGCTG GTTATGGTGG TGCTCGAGGC
GGCACGGTAG GCTACATGCC TCCTGAGCAA GTTGAAGGCA TGCTTGTTGA CGAACGTGCT
GATATTTTCT CGCTTGCTGT TGTTTTGAGA CAGGCCCTTA CAGGATCTAA TGTATTCTCA
GGCAGAACTG CAAAGGAATC GCTTGATCGT ATATACAAAG GTCCAAAGAT TCCTCTGTTA
AAAGAAGATC CTGAAGTTCC GTTTGCTGTA GATGCGGCCT TGACGCAAGC ACTTTCTCCT
GAGCCATCTC TGCGACAGGG CAGTATTTCT GAATTCGCGC AAGAAATTGT GACTCCTCTT
GGCAACGAAA AACAGGGCGA GAAAAGCCTC AAAGCCTTAG TAGAACAATC AGAAGAAGAG
ACCGAGACCT GGGATGTCAA GCATCTTCCT CTTTCAATTC GTTTCCCCTG GCTGCCCTCA
GTTGCTGTGC GTGGTACATC TGCACTGGTC ACCGGCGTTC TTCTCGCCCA ATTGTTTCAG
TTTATTGAAC CAGATTCACT CATATTTATT GTCGTGGGCT CCCTTGTGGG AGCAGCAATC
GCCGCTCTTT GGACACCCTT AGGATCCGCG CTTGTCATTG CGTGTACAGC GTACGCTCTA
GCGAGCATTA GTCCTACCAG CACTTCATTC CCATTTGCAA CGCTTGTAAC CTTAGTGAGC
GTTATCTGGT GGGCATTTGC GGGAAGAGCC TCAAAACTCA GCAGTATTAA CTGCTTGCTA
GGTGCGTTAT TACCTACTCC TGTTTCGGCA CCAGCTCTTG CCTCTGCTAC TATGCGACCT
TTGCCTGCGG TTTTGACAGG AGCCTTCAGC TATCTCTTTG GAACTCTGCT TATTAAAGGC
ATGTCTTTTG GATTTGCTGC AACACCTCTT GCCTATGACT ACACCTCACT AGCCGCAGGT
CTTCCTTTCT GGATCCGTTT TGGAACATGC GCACTATCTG CTCTTTTAGG CTCACTGATA
AGTCAAAAAA GACGTCGCGG ATGGATGATT TTTGGACAAA TTGTCTGCGC TACAGTACTT
TCAGGTGGCT TTATATGGGC AGCTTGGATG GAGAATCCCA ATTTTTGGGT AGTTGAAAGT
ATAGTTTCAG TACTAATTAC GGTATTCTTA TGTGTGTTTG TATGTATTGC AATTGTCCTG
ATAGGTCCAC TTCAAGCGGA TCAGGAAGGC GAGGAATTAA ATGAGCTTTC TTAG
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| Protein sequence | MSDSRSQTTQ TTYIHAPSAQ QTTFAAEPEV LLDRYRVLAR RGNGGFGTVC TCWDTRLQRR
VAIKRMPLLG ASETPGVLAS TVDEALAEAR TACLLAHPNI VTVHDFEIEG NYAYLVMEFV
DGLNLSELLA RVEGGYLTYA EAAHMVSSLA KALQYAHDNG VLHLDIKPTN IMIDRQGTVK
LADFGMATLA SAAGYGGARG GTVGYMPPEQ VEGMLVDERA DIFSLAVVLR QALTGSNVFS
GRTAKESLDR IYKGPKIPLL KEDPEVPFAV DAALTQALSP EPSLRQGSIS EFAQEIVTPL
GNEKQGEKSL KALVEQSEEE TETWDVKHLP LSIRFPWLPS VAVRGTSALV TGVLLAQLFQ
FIEPDSLIFI VVGSLVGAAI AALWTPLGSA LVIACTAYAL ASISPTSTSF PFATLVTLVS
VIWWAFAGRA SKLSSINCLL GALLPTPVSA PALASATMRP LPAVLTGAFS YLFGTLLIKG
MSFGFAATPL AYDYTSLAAG LPFWIRFGTC ALSALLGSLI SQKRRRGWMI FGQIVCATVL
SGGFIWAAWM ENPNFWVVES IVSVLITVFL CVFVCIAIVL IGPLQADQEG EELNELS
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