| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1333 |
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| Symbol | |
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| ID | 8414218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1499605 |
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| End bp | 1500285 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645022930 |
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| Product | histidine kinase |
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| Protein accession | YP_003180348 |
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| Protein GI | 257785131 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000137869 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000238136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | GTGAATGACG CAAGCCACGA ATTGCGCACC CCCATTGCGG TTATTCGCGG GTATGCCGAT
ATGCTTGATC GCTGGGGAAA AACTGACGAG GCGGTTCTTG ATGAATCTAT CGCCGCATTG
AAATCCGAAA GCGAGCACAT GCATGAGCTC GTTGAACAGC TGCTCTTTCT TGCACGAGGC
GATGCCGGCA GAAATACCCT TACCACGGCT CACGTAAATT TTGCACGGCT TGCCTATGAC
GTATGGGAAG AGTCCGAGAT GATTGACCCT GACCATCGCT ATGTCCTGGA CTTTGACGCA
ACGTTTATGA ATGAACCGCA CTATCAAGTT GTTGGCGATA TCGCGCTGCT CAAACAATGC
CTGAGAATCA TTGTCCACAA TGCCGCCCGC TATTCTCCTT CGAATACATC CATTACATTT
GACGTTTCAT ATGACGAGAA GTACGTCCGT GTATCTATAC AAGATAAAGG TGTTGGCATA
TCCGACGCAG CGGTTTCACA TATTTTTGAG CGGTTTTGGC GCGCCGACAG AGCCCGTGCG
GAAAATAACG ACGGGTCCGG CCTCGGCCTC TCTATTGCAA AGTGGATCGT TGACAGTCAT
GACGGCTCTG TCGACGTGCT CTCGCGCAAA GGTGTAGGCA CGCGATTCAC CATTGCTATA
TCTCGCGACG AGCAACCGTA A
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| Protein sequence | MNDASHELRT PIAVIRGYAD MLDRWGKTDE AVLDESIAAL KSESEHMHEL VEQLLFLARG
DAGRNTLTTA HVNFARLAYD VWEESEMIDP DHRYVLDFDA TFMNEPHYQV VGDIALLKQC
LRIIVHNAAR YSPSNTSITF DVSYDEKYVR VSIQDKGVGI SDAAVSHIFE RFWRADRARA
ENNDGSGLGL SIAKWIVDSH DGSVDVLSRK GVGTRFTIAI SRDEQP
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