Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1332 |
Symbol | |
ID | 8414217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 1498673 |
End bp | 1499608 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645022929 |
Product | Glutamate--tRNA ligase |
Protein accession | YP_003180347 |
Protein GI | 257785130 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000257577 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00027046 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACCCTT GCGTTGGAAG GTTTGCGCCC ACTCCTTCCG GAAGAATGCA TCTTGGTAAC GTTTTCTCAG CGCTTATGGC TTGGGCTAGT ACTCGTTCCC AAAATGGCAA CTTTATTCTT CGCATCGAAG ACTTAGATAT TCGCGCTCAT AACCCTCAAT ATACCTCCTA TCTTCTTGAT GACCTGCAGT GGTTGGGGCT AGATTGGGAC AGAGGCCCGT TCTACCAAAG TAAGCGTACA GAGCTCTACC AAGAGGCTCT TTTAAGATTA AAACAGCAGG GGCTCCTATA TCCTTGCTTT TGCTCCCGAG CAGACTTACA CGTCGCGCAG GCCCCTCATG CCAGCGACGG TACGTATATC TATGCAGGAA CTTGCAGCAA TCTAAGCCAG TCTGAGCGTG AAGAACTCTC AAAACATAAA ATTCCAGCAA CACGTATGCG AGTTTCTAAT AAGAACTACA CATTTGAAGA CAAAGTCTAT GGTCCAATAT CTCAAAACCT TGCTGAATCA TGTGGAGACT TTATTGTCCA ACGTGCAGAC GGAATCTTTG CTTATCAGCT TGCTGTGGTA GTGGACGATG CTGATATGGG CATAACTGAA GTAGTCAGAG GATCGGATCT TCTCTCCTCG ACACCTAGAC AACTTTATTT ACAAGACACA CTTGGTCTTT CTCATCCCAC ATACGCTCAC CTCCCCTTAC TTGTTGCACC GGATGGTAGA AGGCTTTCCA AACGTGACCG TGACTTAGAT CTTGGTGCCC TTAGAGCTCA AGGAAAAACA CCAGAAGAAA TTCTTGGCTT TTTGGCTTAT TGCATAGGTC TTGCGGAAAA GGATGAAACT CTTTCTGCAG CACAAGTTGT AAATCGCTTT TCCTGGGATG CACTTCACGC TCACCGAAAA AACGTGGTTG TTGAGCATTT TTCACATGTT TTGTGA
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Protein sequence | MNPCVGRFAP TPSGRMHLGN VFSALMAWAS TRSQNGNFIL RIEDLDIRAH NPQYTSYLLD DLQWLGLDWD RGPFYQSKRT ELYQEALLRL KQQGLLYPCF CSRADLHVAQ APHASDGTYI YAGTCSNLSQ SEREELSKHK IPATRMRVSN KNYTFEDKVY GPISQNLAES CGDFIVQRAD GIFAYQLAVV VDDADMGITE VVRGSDLLSS TPRQLYLQDT LGLSHPTYAH LPLLVAPDGR RLSKRDRDLD LGALRAQGKT PEEILGFLAY CIGLAEKDET LSAAQVVNRF SWDALHAHRK NVVVEHFSHV L
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