| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1275 |
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| Symbol | |
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| ID | 8414155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1432133 |
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| End bp | 1433380 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645022867 |
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| Product | amidohydrolase |
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| Protein accession | YP_003180290 |
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| Protein GI | 257785073 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGA TTGCTTTTGT AGGCGGAAAG CTCGTTGACG GCACTGGCGC CGCTCCTGTT
GAGGATTCTC TTGTTCTCGT AGACGACAAG AAGATCGCTT ATGCTGGTCC TCGTACTGAG
GTTCCAGAGG GCTATGAGGT CCGTGACATT CAGGGCCGTA CCATTATGCC AGGTCTTATC
GATACCCACC TGCACTTCTC CGGCAACCTG ACCGACAACG ATAACGACTG GGTTATCGAG
TCTGTTGCTC AGAAGCAGGC ATGCGCAGTC AAGCAGTCCT GGGACGCTCT CTCCCACGGT
CTTACCACCG TCTGCGAGAT TGGCCGCAAT GGTATCGCAA TTCGTGACCT CGTTAACATG
GGTGTCATGG AAGGCCCACG TATTTACGCT ACCGGCCTTG GCTTCTGCCG CGTTGCTGGT
CATGGTGACT GCCACCAGCT CCCACAGGAG ATTTCCAAAA ATGGTCATCC ATGGGGCGAC
CAGGTAGATG GTCCTTGGGA TCTTCGTAAG GCAGTTCGTC GTCGCCTTCG TGAGAACCCA
GACGCAATTA AGATTTGGGC TACCGGTGGC GGAATTTGGC ACTGGGACTC CGGTCGAGAT
CAGCACTACT GCTACGAGGA GATCAAGGCA GTTTGCGACG AGGCAGCAAT GGTTGGCATT
CCTGTTTGGT CACACTCCTA TAACAGCTTC TCCGCAGCTT ATGACTCCGT CCGTTGCGGC
TGCGAGCAGA TGATTCACGG CTTCGAGCTT GATGCAAAGA CTCTTGATCT TATGTGCGAG
CAGGGCACCT TCTTCACTCC TACCATCGGC TTCCTGCCAA CTTGGTACGG AACTTATCCA
CCAGAGTGGA CTCCAGAGCT TGACGCATTC CCAGGTGATA CTGTTGTCGA GAAGGGCCTC
AACCGTACAT ACGAGAACCT CCGCAACGCT AACGAGCGCG GCGTTACTCT CACCATCGGT
TCCGACTCCT TCAGCTTCGT GACTCCTTAC GGCTGGGTTA CCATCGATGA GATGTATGAC
TTTGTTGAGA AGGCTGGCGT CACCATTCTT GAGACTATCA AGGCTGCTAC CCTTAACGGC
GCAAAGATGG TTCACCATGA GGATGAGTTT GGCTCCCTCG AGGCTGGTAA GCTTGCTGAC
CTCCTGGTTG TCAAGGGCGA CGTTGCTACT AACATCCGCG ACCTTACCCC AGATAACATG
GAAGTTATCA TGAAGGAAGG CAGCGAGGTT ATTCGCGGCA CCTTCTAA
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| Protein sequence | MSKIAFVGGK LVDGTGAAPV EDSLVLVDDK KIAYAGPRTE VPEGYEVRDI QGRTIMPGLI
DTHLHFSGNL TDNDNDWVIE SVAQKQACAV KQSWDALSHG LTTVCEIGRN GIAIRDLVNM
GVMEGPRIYA TGLGFCRVAG HGDCHQLPQE ISKNGHPWGD QVDGPWDLRK AVRRRLRENP
DAIKIWATGG GIWHWDSGRD QHYCYEEIKA VCDEAAMVGI PVWSHSYNSF SAAYDSVRCG
CEQMIHGFEL DAKTLDLMCE QGTFFTPTIG FLPTWYGTYP PEWTPELDAF PGDTVVEKGL
NRTYENLRNA NERGVTLTIG SDSFSFVTPY GWVTIDEMYD FVEKAGVTIL ETIKAATLNG
AKMVHHEDEF GSLEAGKLAD LLVVKGDVAT NIRDLTPDNM EVIMKEGSEV IRGTF
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