| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1264 |
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| Symbol | |
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| ID | 8414143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1419596 |
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| End bp | 1421656 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 645022856 |
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| Product | conserved repeat domain protein |
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| Protein accession | YP_003180280 |
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| Protein GI | 257785063 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01451] conserved repeat domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA GTTTTCTTAA GAGAATCTCG GTTTTTCTAA CCATGATTAT GGCATGCTTG
GTTATGTTTG TTAACACAGC TCAGGCATTT GATCGCCAGA AAGACGATAG TGATCTTACT
CAGATTAACA TCTATCAGTT CACTATGACC AGGGATAACA TGACTGTTCT CTCACAAGGG
GATGGGGTTA AACGCGTGGA GATTCCTGCG TCAGATACAG GTAATCTTCC TTCAACAGCT
TTTGTTATGC AGCCTACTAA GGATGGCTCT AACCATCAGT ATAATCAGCC ACTTTCATTG
AAGTTTTCTA ATGCTGGCAC CGTTGATGGT GAATCCGTTG ATGTTTATGT AACGGTTAAT
TCTTTGGACC TTACCCTTAA AAATACAAAT GCAGACTACA ATAATCCTAA TAAGACTGAT
GTTCCGTTTT TGACTGTTGA TGAAAACTGG GGAACAAAGT CTTTCTCGCT TATGGATTAT
ATTGATGTGA ATCACCCTAG TTATACAGCA GACATGCTTG GATCCTATGC AATTAACGCT
AATGTAACTA TGGAATTAAG GTACTCTGAT GGAACGCCGT GCAACCTTAA ACTTGTCATG
CAGCCAAGTG ATATTGACGT TTTAAATGGC GGCACAAATG AGACTTTTTC TCTGGTAAAT
GCAGAGAGCA CCGTTGACAG TATTGTTATG AGCAATAGAA ATGTTCTTAC AGAAACTACA
AATGGTAATA AAATAACGTG GAATCCAACT CGTCCAACTT CTGGAAACGA TCAAGAAAAA
AATCTTGCGG GTTTTGCTGT TAAGTCAAAG TCCAATTCAT TAACTTTTGA GTCTACAAGT
GCTGCTACAA GTGGTAGCCT TTTTGGTGCT TATACTGAAG TGATAAGTCC AGCTCCTGTA
AAAGCGGTTG ATCCAGAGCA GGCTCCTGCT AAGGCTGGGG AAGAAATTAC TTACACTGGA
ACATTTACTT TACCAAGACA AGGCATTGAT ACTATCGGCA AGATCAAGTC GATGAGTATG
GTTGATACGT TTGATGAGCG TCTTGACTAT CAGAGCCTTA GCGTTTCGTT TGATGGACAG
ACTCTTACTG AAGGCACCGA TTACACCGTT TCTGTCGATG GTCAAAAGGT GACTGTAGAC
ATTGATGCTC ATTTACTTAC CAAAGAAAAT GGCGGTAAAA AGTTTGTCAT TACGTATAAA
ACTCTAACTA ATTCAAAGAT AGAGACTGAC AGTTCAAATA TTGATAATGA GCTTACCCAG
GTTGTTGACG GTAACATTGC TCACTCTAAT AAAGTAACCA CAGAGCTTCT TTATGAGAAG
ACTCATGAGT ACGTTAGTGG CACCCCTAAT AAGGAACTTC CACAAGAGGT TCTGGATTTA
CTTCCTGGTA AGCAGACCAG AATTCCAAAC GGCACAACTG TTACACCTGA TCAACCACTT
GGTGGAGTAA CTCGTGTTGA AACTTCTGAT GGAACTTGGG TGTTCATTGG TTACGATCAC
GATTCTGAGA TTATTGATCA CAAGAACGCA CACTTCATTG GTGTTTGGGT GATTTTGCCT
CAGCCAAAGA AGGACGTTCT TGATAGTGAG GGTAATTCTA TTGATGGTAA TAAGGTAACT
GCAGGACAAG TACTCACTTA TTCTGTGACA TATACCAATA CCACCAATAC TGCTCGTGAT
GTTACGGTTA CTGATGTTAT TCCAGAGCAC ACAACTTACG TTGATAATTC TGCTGATAAC
GGTGGAGTTT ATGATAAGGC TACTCGTACT GTAACCTGGA CGAAAAATGT TGCACCTGGT
GAGACCCTCA CGGTTACTTT CCAAGTTAAG GTTAATAAGG GCGTTAAGGA TATTACTGTT
GTGAATACTG CTCACGTCAG TGATGGTCTC ATTGACACCG ATACTAACAC TACAAAAAAT
CCTGTTATAC CTAAGCCACG TAAGTCTCGT GTTCCAAATA CTGGTGACAA CACAATGCGT
GATGTAATTA TTGTTGCTGG TTTAGGTGGA ATAGCTCTTC TTATAGTTAT TGTTTTAAAA
CTTCGCTCTT CGAGAAAGTA A
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| Protein sequence | MKKSFLKRIS VFLTMIMACL VMFVNTAQAF DRQKDDSDLT QINIYQFTMT RDNMTVLSQG
DGVKRVEIPA SDTGNLPSTA FVMQPTKDGS NHQYNQPLSL KFSNAGTVDG ESVDVYVTVN
SLDLTLKNTN ADYNNPNKTD VPFLTVDENW GTKSFSLMDY IDVNHPSYTA DMLGSYAINA
NVTMELRYSD GTPCNLKLVM QPSDIDVLNG GTNETFSLVN AESTVDSIVM SNRNVLTETT
NGNKITWNPT RPTSGNDQEK NLAGFAVKSK SNSLTFESTS AATSGSLFGA YTEVISPAPV
KAVDPEQAPA KAGEEITYTG TFTLPRQGID TIGKIKSMSM VDTFDERLDY QSLSVSFDGQ
TLTEGTDYTV SVDGQKVTVD IDAHLLTKEN GGKKFVITYK TLTNSKIETD SSNIDNELTQ
VVDGNIAHSN KVTTELLYEK THEYVSGTPN KELPQEVLDL LPGKQTRIPN GTTVTPDQPL
GGVTRVETSD GTWVFIGYDH DSEIIDHKNA HFIGVWVILP QPKKDVLDSE GNSIDGNKVT
AGQVLTYSVT YTNTTNTARD VTVTDVIPEH TTYVDNSADN GGVYDKATRT VTWTKNVAPG
ETLTVTFQVK VNKGVKDITV VNTAHVSDGL IDTDTNTTKN PVIPKPRKSR VPNTGDNTMR
DVIIVAGLGG IALLIVIVLK LRSSRK
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