| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1254 |
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| Symbol | |
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| ID | 8414133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1403776 |
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| End bp | 1404870 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 645022846 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_003180270 |
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| Protein GI | 257785053 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACTGA GCGAGAAAAT CATGAGCCTC AGAAAGCGGA ATGGTTGGTC ACAAGAAGAA
CTTGCACGAC AGCTTAATGT TTCAAGACAG TCCGTTTCCA AATGGGAGTC TATGGCTTCC
ATGCCAGATA TTCAAAAGAT AATGACTATG AGTGAGCTCT TTGGTGTCTC AACCGACTAT
CTGCTTAAAG ATGAAATGGA AGATCTCCCT GCAACTGCAG CATCTTTAGA CTCTGCAGAA
ACCTCAAGTG AGAGTGCTAC TCCCGAATCT TCTTCACAAA CTAATGAGAA AGACAACTAC
TCCTCCACAA AGATTAAAGT TTCTCTGGAT CTAGCAACGG AATATTTGGA TACTATTGAA
AAGACATCTC GTACAACAGC CTTTGCCGTT ATGCTCTTTA TCTTAGGTCC TGCGATTCTT
GGGTCGCTTG CCACCTACGG AAAAACTCAA ACAGATTTTA ATCTCGCGAT TATCAATTCA
GGTGCACTCA ATACATCCAA CCTTCTTAAC ATCATAGGTG TTTCTATTAT GATGCTCTGC
ATTGCAGCTG GTGTAGGCCT TCTGATTTTA CAGAACGTAA AACTTTCACC ATTCAAAGAA
CTTAAAGAAA ATACCCTTGA TCTGCAATAT GGTGTTGAGG CAGCTGTTAA GCGACGCGCT
GAATCTACAA AGTCCCTGCG CTCTTTTCAG CAAGCTGCTG GAGTTTGTCT TACTATTCTG
AGCTCTATCC CTTTTGTTAT CGCATCGTAT TTTGAAACTG GTCTTTACTT CTCAATAGGA
TTTTTTATCG CCATGTTCAT GGTTGCTTTT GGGGTCTTTT TGCTCGTTAA TTCTGGTATT
GTCAAAAGTA GCTACAATGT TCTTCTCCAA GAAGATGACT ATTCAAATAG CGAGAAAATC
TCCAAAAATA AACAAAAGTC TATCTACGCC CAGTATAAGC AATATACGCA AGCTTACTAT
GTAGTTATCA CACTCATGTA TCTTGGCTAT AGCTTTATTA CCTATGACTG GGGTAGGAGC
TGGATCATTT GGCCTCTCTC TGCACTTCTC TACCACGCTG TCATTAGTGT TTTAGGTGCA
TTTAAAAAGA AATAA
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| Protein sequence | MLLSEKIMSL RKRNGWSQEE LARQLNVSRQ SVSKWESMAS MPDIQKIMTM SELFGVSTDY
LLKDEMEDLP ATAASLDSAE TSSESATPES SSQTNEKDNY SSTKIKVSLD LATEYLDTIE
KTSRTTAFAV MLFILGPAIL GSLATYGKTQ TDFNLAIINS GALNTSNLLN IIGVSIMMLC
IAAGVGLLIL QNVKLSPFKE LKENTLDLQY GVEAAVKRRA ESTKSLRSFQ QAAGVCLTIL
SSIPFVIASY FETGLYFSIG FFIAMFMVAF GVFLLVNSGI VKSSYNVLLQ EDDYSNSEKI
SKNKQKSIYA QYKQYTQAYY VVITLMYLGY SFITYDWGRS WIIWPLSALL YHAVISVLGA
FKKK
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