Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1252 |
Symbol | |
ID | 8414131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 1401364 |
End bp | 1402302 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645022844 |
Product | 1-phosphofructokinase |
Protein accession | YP_003180268 |
Protein GI | 257785051 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1105] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) |
TIGRFAM ID | [TIGR03168] hexose kinase, 1-phosphofructokinase family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCA TCTATACTGT TACGCTCAAC CCTGCTCTAG ACAAGACTGT TCATGTTCAA AACTTTACAT TTGACCAGGT AAACCGTATC AACTGGCTCA GACGAGACGC TGGTGGTAAG GGTATTAACG TCTCCAAAGT CATTGCAAAA CTTGGTGGAG AGTCAACTGC CATTGCTGTT CTCGCTGGCC AAACCGGACA ATGGATTGCA AACGCTCTTG ACGAGAATAA CATCAAGGTC CATGCAATTA CTGTTCCTGG AGAAACGCGC ACCAATCTTA AGGTTGTTGA TGCCGAGGGC GGCACCAATA CCGACATCAA CGAACCTGGC CCCGAGGTCA CCGACAGCAT ACTTGACCAG GCACTTGTTG ATGTTGTCTC CAAGACTTCC GCTGGCGATA TCGTAGTTCT TTCTGGCAGC CTCCCCCGCG GAGCTTCCAC TAACACATAC GGTCGTTGGA CGCGTGCTCT ACGTGACGCC GGGCTGAAGG TTTATCTGGA CGCCGATGGT GCAGCGCTTT CAGCAGGTCT TGAGCAGAAA CCATACTTCA CCAAGCCAAA TGATCATGAG CTCTCCGCCA TGCTGGGCCG TGAGCTTACC GACGTGAACG CGATTGCCAC AGCCGCATCC GAGATTGTCG CTGGCGGCAT CGACACTGTC TGCGTTTCTA TGGGAGGCAA CGGTGCCGTC TATGCTACGA CCAACGAAGT TTGGTATGCA GGTCCAGTAA AAGTCAAGGT AGGAAGCACT GTCGGTGCCG GTGACTCCGT TGTGGCAGCG TTCGCCTTTG CAGATGCACA GGGTCTCTCG ACAGAAGACG CACTGCGACT GGCCATGGCC ACGGGTGCTG CAAACGTCAT GGAGAGCGGA ACTCAAGCGG CAGAGCGCTC GGTTGTGGAT TCGCTTATCA AGAAAGTCCA GTTCACGCGC CTGCGCTAG
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Protein sequence | MPSIYTVTLN PALDKTVHVQ NFTFDQVNRI NWLRRDAGGK GINVSKVIAK LGGESTAIAV LAGQTGQWIA NALDENNIKV HAITVPGETR TNLKVVDAEG GTNTDINEPG PEVTDSILDQ ALVDVVSKTS AGDIVVLSGS LPRGASTNTY GRWTRALRDA GLKVYLDADG AALSAGLEQK PYFTKPNDHE LSAMLGRELT DVNAIATAAS EIVAGGIDTV CVSMGGNGAV YATTNEVWYA GPVKVKVGST VGAGDSVVAA FAFADAQGLS TEDALRLAMA TGAANVMESG TQAAERSVVD SLIKKVQFTR LR
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