Gene Apar_1195 details

Gene Information

• Locus tag: Apar_1195
• ID: 8414073
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Atopobium parvulum DSM 20469
• Kingdom: Bacteria
• Replicon accession: NC_013203
• Strand: +
• Start bp: 1341060
• End bp: 1341830
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 645022789
• Product: nitroreductase
• Protein accession: YP_003180214
• Protein GI: 257784997

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.300642
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACCTAA AAGAAGCTAT GGACCAGCGC ATTTCCCTGC GCGCCTACGA CCAAAAGCCT 
ATTGAACAAG AAAAACTTTC TCAGCTCCAG GAAGCCATTA ACGTTGCAAA TGCCCAGATG 
GCAAAAGTTG CACCCGATCA CCCTGCAATC CTTACCATCG AGGGTCCTCA CCTTGAAGAT 
GGCACTTCCG TCCACATGAA GAACAAGTCC ATTGTCGGCC CCATTTACCA CTACATAGCA 
GGCTATTGTG AAGATGCAAT TGCCCGTGAA CTCATCGGCT ACTATGGCGA GAAGATCGTT 
CTTCTCGCCA CACAACTAGG CATAGGCTCA TGCTGGATTG CCGAGACCAT GGACTGGAAA 
ACCCTAGCTC GTGACGAGTA CAACGGCCTT AAGCTGGGCA TTATTATTTC TATCGGCTAT 
GCTCCGGAAA AGATTCCGCT CAAGCAGGAA GGTATTCGTA CCGCAATTCG CCTACGCACC 
AAGAAGCCCG CGCAGATTAT GACTGCAAAT GGCGCGCCAA CTGAACCGAA GCAGATGCCT 
GAGTGGTTTA ATCGTGGCAT TGATGCGGTT TTGGCATGTC CAACTGCCAT CAACAGACTG 
CCTGTCGTAT TTGACCTGAC AGATGGCGTG GTAAGCGCTT CTATGCCTGA CCAGCGCCAC 
TTTGTTCAAG ACTACGACTT AGGTATCTCC AAGCTGCACT TTGAGCTTGC CGCTGACCTT 
AAAGGTACGT GGGAACTTGG ACAGCCTGGT CGCTTTATCG TTTCTGAGTA G 

 

Protein sequence

MDLKEAMDQR ISLRAYDQKP IEQEKLSQLQ EAINVANAQM AKVAPDHPAI LTIEGPHLED 
GTSVHMKNKS IVGPIYHYIA GYCEDAIARE LIGYYGEKIV LLATQLGIGS CWIAETMDWK 
TLARDEYNGL KLGIIISIGY APEKIPLKQE GIRTAIRLRT KKPAQIMTAN GAPTEPKQMP 
EWFNRGIDAV LACPTAINRL PVVFDLTDGV VSASMPDQRH FVQDYDLGIS KLHFELAADL 
KGTWELGQPG RFIVSE