| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1181 |
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| Symbol | |
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| ID | 8414059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1321621 |
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| End bp | 1323102 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022775 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_003180200 |
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| Protein GI | 257784983 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00250228 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000333718 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGTCT ATAACACTCA GACGCATAAA AAAGAAGAGT TTAAGCCAAT CGATGAAGGC
AAAATCCGCA TGTACGTATG CGGTCCTACG GTCTACGACC AGATTCATAT CGGAAATGCC
CGTACGTTCC TCTCGTTTGA CGTTATTCGA CGTTATCTGA TGTATAAAGG TTTTGAGGTT
ACGTTTGCTC AGAATCTGAC CGATGTTGAT GACAAGATTA TTCAGCGCGC CAACGAGCAG
GGAAGGACTG CTCAAGAGGT CTCTGAAGAG TTTTCTCAGG CGTTTATCAA GCAGATGCAT
CGCTTCAATA TACTGGATCC AGATATTCGT CCTCGCGCAA CGCATGAGAT TGAAGCCATG
CTCCAGATGA TTCAATCTTT GATTGAGCAG GGTTACGCTT ACGCGGTGCC TTCGGGCGAC
GTGTATTTCT CGGTTCGTTC TGACCACGAC TATGGTGTGC TTTCTGGCCG CGATCTTGAT
CAGCTTCGCG CAGGTGAGCG TGTTGAGGTT AATGACGAGA AACGCGATCC ATTTGACTTT
GCACTCTGGA AGGCTGCTAA GCCTGGTGAG CCTAGCTGGT CAAGCCCATG GGGAGAAGGT
CGTCCAGGTT GGCACAGTGA GTGCTGTGCG ATGATTCATC GCTATTTAGG CACTCCAATT
GATATTCATG GTGGTGGCTC TGACCTGGTA TTCCCTCACC ATGAGAACGA GACCGCACAG
GCATCTTGCG CCTGGCATGC TCCTCTCGCT AATTATTGGA TGCACACCGG AATGCTGCGT
GTTGACGGTG AGAAGATGTC TAAGTCTTTG GGTAACTTCT ATACGCTTAA GGAAGTTTTG
GACAAGTATC CTGCAGATGC AGTACGACTT TTGATGCTTC AAACGCACTA TCGCGCGCCA
CTTGATTTCT CGTTTGAACG CCTTGAAGGA ACCGTTGGCA CACTCGAGCG CATGAAGACC
TGCGTTGCAA ATCTTCGTTG GGCCTACAAG CAGTCTTCTG CTCAGCACGA GCTTTCTGAC
GCTGATCGTA CGCTTGCTGA GGCAATTAAC ATAGCCCAGA GCGAGTTTGA CGCTCAGATG
GATGATGATT TCAATACCGC AGGAGCGCTT GCTGCCATCT TTGCGCTGGT AACTGCTGCA
AATACCTATC TTGCAGAGGT TGGGCAGAAC GTTGGCGCAA GCCCTGTTCT CCGTGCATCA
GATATGTTGT GCGAGCTCAC AGGAGCCTTG GGAATTGATT TGACCCAGGC GGCGTCTACT
TCTGATTTAC CAGAAGAGCT TGTAGCACTT GCCGCCCAGG TAGCAGCCTA TGAAGGCTCT
TCAGCTGACG AGGCCGCAGA GGTTTTGCTT GCTGCTCGTC AGGAAGCTCG TTCCCAGAAG
AACTGGGCAG TTGCCGATCA AATTAGAGAC GGCATTGCCG AGCTTGGACT TTTGATTGAA
GATACCGCCG CTGGCGCTCG ACTTAAGCGT AAGGCAGACT AA
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| Protein sequence | MLVYNTQTHK KEEFKPIDEG KIRMYVCGPT VYDQIHIGNA RTFLSFDVIR RYLMYKGFEV
TFAQNLTDVD DKIIQRANEQ GRTAQEVSEE FSQAFIKQMH RFNILDPDIR PRATHEIEAM
LQMIQSLIEQ GYAYAVPSGD VYFSVRSDHD YGVLSGRDLD QLRAGERVEV NDEKRDPFDF
ALWKAAKPGE PSWSSPWGEG RPGWHSECCA MIHRYLGTPI DIHGGGSDLV FPHHENETAQ
ASCAWHAPLA NYWMHTGMLR VDGEKMSKSL GNFYTLKEVL DKYPADAVRL LMLQTHYRAP
LDFSFERLEG TVGTLERMKT CVANLRWAYK QSSAQHELSD ADRTLAEAIN IAQSEFDAQM
DDDFNTAGAL AAIFALVTAA NTYLAEVGQN VGASPVLRAS DMLCELTGAL GIDLTQAAST
SDLPEELVAL AAQVAAYEGS SADEAAEVLL AARQEARSQK NWAVADQIRD GIAELGLLIE
DTAAGARLKR KAD
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