| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1173 |
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| Symbol | |
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| ID | 8414046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1314971 |
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| End bp | 1315678 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645022762 |
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| Product | ribosomal protein L1 |
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| Protein accession | YP_003180192 |
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| Protein GI | 257784975 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000649528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000262625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCCTAAGC ACGGAAAGAA CTACAAGAAT GCAGTTGCCA AGGTAGACGG TTCAAACCTC
TACAGCCCAA AAGAGGCAGT AACCCTTGCT AAGGAGCTTG CAACTGCTAA GTTTGACGAG
ACCATTGAGG TAGCAATTCG CCTTGGTGTC GATACTCGTA AGGCTGACCA GAACGTTCGC
GGTTCCATCT CTCTGCCTCA CGGCACTGGT AAGTCCGTTC GCGTTGCAGT CTTTGCAGAG
GGCGAGAAGG CCCGCGAGGC TGAGGCAGCT GGCGCTGATA TTGTTGGTGG CGACGAGCTT
ATCGCAGAGG TCGAGAAGGG CATGCTTGAC TTTGACGCAG CAATCGCAAC CCCTCAGATG
ATGGGTAAGG TTGGTCGTCT TGGTCGCGTT CTTGGTCCTC GTGGCCTTAT GCCTAACCCT
AAGCTCGGCA CCGTTACCAT GGATGTTGAA AAGATGGTTA ACGAGCTCAA GGCTGGTCGT
GTTGAGTATC GTGCAGACCG TTTTGGTATC TGCCACGTTG CAATCGGCAA GGCTTCTTTT
GAGGTCCAGC AGCTTGTTGA GAACTACGGC GCACTTATTT CTGAGATCAT TCGCGTCAAG
CCATCCAGCG CAAAGGGTAA GTACGTCAAG ACTGTTGCTA TTTCCTCTAC TATGGGTCCT
GGTATTAAGA TTGATCCAAC CAAGGTTCGT AACCTCATGG AGGACTAA
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| Protein sequence | MPKHGKNYKN AVAKVDGSNL YSPKEAVTLA KELATAKFDE TIEVAIRLGV DTRKADQNVR
GSISLPHGTG KSVRVAVFAE GEKAREAEAA GADIVGGDEL IAEVEKGMLD FDAAIATPQM
MGKVGRLGRV LGPRGLMPNP KLGTVTMDVE KMVNELKAGR VEYRADRFGI CHVAIGKASF
EVQQLVENYG ALISEIIRVK PSSAKGKYVK TVAISSTMGP GIKIDPTKVR NLMED
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